Clarias gariepinus (North African catfish): 128526612
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Entry
128526612 CDS
T10780
Symbol
dync1i2b
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
cgar04814
Motor proteins
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128526612 (dync1i2b)
09142 Cell motility
04814 Motor proteins
128526612 (dync1i2b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128526612 (dync1i2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128526612 (dync1i2b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128526612 (dync1i2b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
128526612 (dync1i2b)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
128526612 (dync1i2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_EML
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_HPS5
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_IP5PC_F
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
128526612
NCBI-ProteinID:
XP_053354602
LinkDB
All DBs
Position
6:4946210..4958428
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AA seq
647 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETEGRGEGASPSNDDSDLERKRRET
EALLQSMGITDPAMVQPLRIVTEDTCMFHYLVPPPMSPSAKSVGTPSETGSQDSADGATG
VRALHWDSDPSTLLLHSDSQHGRGPLRLGMAKVTQVDFPPRELVSYSKETQTPVSTQPKE
AAEENEEEDLAVALAAHESLQENEPHADEDEAPPHELTEEEKQQILHSEDFLTFFDQSSR
IVERALSEHVDVCFDYSGRDLQDKEGDTQGGTKLSLNRQFTDERWSKHRVVTCLDWSPQY
PELLVASYSSNEEAPHEPDGVALVWNMKYKKTTAEYVFHCQSAVMSAAFAQFHPNLVVGG
TYSGQIVLWDNRSNKRTPVQRTPLSASAHTHPVYCVSVVGTQNAHNLISISTDGKMCSWS
LDMLSTPQDSLELVFKQSKPVAVTSMAFPLADVNNFVVGSEDGTVYTACRHGSKAGISEM
FEGHHGPVTGLDCHTATGPVDFSHLFVTSSFDWTVKLWSTRNTKPLYSFEDNSDYVYDVM
WSPAHPALFACVDGVGHLDLWNLNNETEVPSASVTVEGNPALNRVRWANSGREVAVGDSE
GRVHIYDVGEQIAVPRQDEWTRFLKTLSELGENQEEAEDLATQRLAA
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagtgagctaaaggcagagctggagaggaagaaacagcgccttgcccag
atcagagaggaaaagaagcgaaaagaggaagaacgcaagaaaaaagaaactgaagggcgt
ggggaaggcgcctctccatcaaatgatgactctgatctggagagaaagaggagggagacg
gaggctctgctgcagagcatgggtatcaccgatcctgccatggttcagcctctgcgaata
gtaacagaggatacgtgtatgtttcattatttagtcccccctcccatgtctccctctgcc
aagtcagtgggcactccaagcgaaaccggcagccaggactcagcagatggcgctactgga
gtaagggctctccactgggattctgacccctctactctcctgctgcattcagactctcag
catggacgaggtcctctccggctcggcatggctaaagtcactcaggtggactttcctccc
cgagaactcgtctcgtactctaaagagactcagacacccgtctctactcaacctaaagag
gcggcagaggaaaacgaggaggaggatctggcagtggcactggccgctcacgaatctctg
caggaaaatgagcctcatgctgatgaagacgaggcgccacctcatgagctgacggaggag
gagaagcagcagatcctgcactcggaagacttcctgacgtttttcgatcagagctcccgc
atcgtggagcgcgctctgtccgagcatgtcgacgtctgcttcgactacagtggacgagac
cttcaggacaaagagggagatacccagggtgggaccaagctgtctctgaacaggcagttt
acagacgagcgttggtccaaacacagagtggtcacctgtctggactggtcaccccagtac
ccagagttgttggtggcgtcctacagcagtaatgaagaagctcctcatgagcctgacggt
gtggcgctggtgtggaacatgaagtacaagaaaacaacagcggagtacgtcttccactgt
cagtcggcagtgatgtcggcagcgtttgcacagtttcacccgaacctggtggtgggtggg
acgtactcgggacagatcgtcctttgggacaatcgtagcaataagcggacacccgtacag
aggacgccgctctctgcctccgcacacacgcacccggtctactgtgtgagtgtagtcggg
actcagaacgctcacaacctcatcagcatctctactgatggcaaaatgtgctcctggagc
ctggacatgctgtccacacctcaggacagtctggagctggtgtttaagcagtcgaaacct
gttgccgtgacgtccatggcgtttcctctggctgatgtgaataacttcgttgtaggcagc
gaggacggcaccgtctataccgcctgcagacacggcagtaaagcgggaatcagcgagatg
ttcgaaggtcatcacggcccagttacaggactcgactgccacacggccaccggacccgtc
gacttctctcacctgtttgtgacgtcgtcctttgactggaccgtcaagctgtggagcacc
aggaacaccaagccactttactcattcgaggataactcagattacgtgtacgacgtcatg
tggtctcctgctcaccctgcgctgttcgcctgcgtcgatggagtcggacacctcgacttg
tggaatctcaacaatgagactgaggttccctcggcttcagtgacagtagagggaaacccg
gcgctaaaccgcgtgcgctgggctaactctggcagagaggttgccgtcggtgattctgaa
ggtcgagtacacatctacgacgtaggagaacagatcgctgtgccgcggcaggacgagtgg
acgcgcttcctgaaaacactaagcgaactcggtgagaaccaggaggaggcagaggatctg
gcaacccagcgcctagctgcctga
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