Clarias gariepinus (North African catfish): 128526631
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Entry
128526631 CDS
T10780
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
cgar04540
Gap junction
cgar04814
Motor proteins
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128526631 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
128526631 (tubb1)
09142 Cell motility
04814 Motor proteins
128526631 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128526631 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128526631 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128526631 (tubb1)
04147 Exosome [BR:
cgar04147
]
128526631 (tubb1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
128526631 (tubb1)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
128526631 (tubb1)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128526631 (tubb1)
Exosomal proteins of colorectal cancer cells
128526631 (tubb1)
Exosomal proteins of bladder cancer cells
128526631 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
128526631
NCBI-ProteinID:
XP_053354667
LinkDB
All DBs
Position
6:complement(29967600..29973754)
Genome browser
AA seq
462 aa
AA seq
DB search
MREIVHLQIGQCGNQISSKFWEVISDEHGISAKGIYEGDMDLQLERISVYFNEANSGKYV
PRALLVDLEPGTIDSVRGSHIGELFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVERV
RNEAEICDCLQGFQFVHSLGGGTGSGMGTLLINKIREEFPDRIMNSFSVMPSPKVSDTVV
EPYNATLSIHQLIENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMTGFAPLTPRGSQQYRALTVPELTQQMFDARNMM
TACDPRHGRYLTVAGVFRGHMSTKEVDEQMLNVQQKNSNYFVEWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFAVMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLVS
EYQQYQDATAELDWEPEEEMTEVEGSAATVPSTRETETVSET
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaattgttcatcttcagatcggacagtgtgggaatcagatcagttcaaagttt
tgggaagttatcagtgacgaacatggtatcagtgcaaaaggaatctatgagggggacatg
gaccttcagctggaaaggatcagtgtctactttaatgaagcaaatagtgggaagtatgtc
ccccgggcactgctggtggatttggagccaggaacaatagacagtgtgaggggaagtcat
attggagaacttttcaggcctgacaactttatacatgggaattctggggctggaaataac
tgggcaaaaggtcactacacagagggggcagagttggtcgagcaagtagtagaacgtgtc
cgtaatgaagctgaaatctgcgactgcttacagggcttccagtttgttcactctttgggc
ggtggtactggctcaggcatgggcaccttgctcatcaacaaaatccgtgaagagttccca
gaccgaatcatgaatagctttagtgtcatgccttctcctaaagtctctgacacagtagtg
gagccatataacgctacactgtctattcaccaactgattgagaatacagatgagacattc
tgcatcgacaatgaagcactttatgatatctgcttccgtaccctcaagctcaccacacca
acatatggagatctcaatcaccttgtatctatgactatgagtggggtcacaacttctctg
cgcttccctggtcagctgaatgctgacctccgtaagctggcggtcaacatggtgcccttt
ccccggcttcacttctttatgactgggtttgctcctctcactccacgtggaagtcaacag
taccgggcacttactgttcccgaactcacccaacagatgtttgatgcccggaacatgatg
acagcatgtgaccctagacatggccgctacctcactgtcgcaggagtatttcgcggtcac
atgtccactaaagaggtggatgaacaaatgctcaatgttcagcagaaaaacagcaactac
tttgtggaatggattcctcacaatgttaaagtggcggtgtgtgacatcccaccacgtggc
cttaaaatggcatcgaccttcattggaaacaatacagccatccaagagattttccgacga
gttggggagcagtttgccgtaatgttccgccgcaaggcatttctgcattggtacacagga
gaaggcatggatgagatggagtttacagaggcagagagcaacctgaatgatctagtatct
gagtaccaacaatatcaggatgccacagccgagctggattgggagccagaggaagaaatg
acagaggtggagggaagtgctgcaacagtaccaagcaccagggaaactgagacagtgagt
gaaacttag
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