Clarias gariepinus (North African catfish): 128526681
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Entry
128526681 CDS
T10780
Symbol
her6
Name
(RefSeq) hairy-related 6 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03460
Fanconi anemia pathway
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128526681 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128526681 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128526681 (her6)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128526681 (her6)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
128526681 (her6)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
128526681 (her6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
128526681
NCBI-ProteinID:
XP_053354772
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All DBs
Position
6:3952199..3954032
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AA seq
276 aa
AA seq
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MPADMMEKNSSSLVAATPASMNSVPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDRCFHPQSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNADPTVLGKYRAGF
SECMNEVTRFLSTCEGVNSEVRTRLLGHLANCMTQLNAMNYQAQAHAGAAPPPPTFGQPV
VQIPGATHVPVPVSVPACKSAPPSGASPSDASKVYGGFQLVPATDGQFAFLIPSGAFTPG
GPVIPVYASGAATPLPAAAASPREASLTSDSVWRPW
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgatatgatggaaaagaactcatcttccctggtggctgcgaccccggcgagc
atgaacagcgtcccggacaaacccaaaacagcctccgagcacagaaagtcatcgaaaccc
atcatggagaaaaggagacgagctcgcatcaatgaaagcttggggcagctcaagacgctc
atcctggacgcactgaaaaaagaccgctgttttcacccacagagctccagacactcgaag
ctggagaaggcggatatcctggagatgaccgtgaagcacctcaggaacatgcagcgcgca
cagatgaccgctgctctgaacgcggaccccaccgtgctcgggaagtaccgcgcgggtttc
agcgagtgcatgaacgaggtgacgcgttttctgtccacgtgcgagggcgtgaactcggag
gtgcgcacccggctgctgggccacctcgccaactgcatgacgcagctgaacgccatgaac
taccaggcgcaggcgcacgccggagccgcgccgcctcctccgaccttcggccagcccgtg
gtgcagatccccggagcgacgcacgtgcccgttccggtctcggtgccggcgtgtaagagc
gcgccaccctccggcgcgtcgccgtccgacgcatccaaggtgtacggcggcttccagctc
gttcccgctacagacggacagtttgccttcttgatcccgagcggcgcgttcactcccggc
ggccccgtcatcccggtgtacgcgagcggcgccgccacgcctctccccgcagccgccgcg
tctccccgcgaggcctcgctcacttcagactcggtctggagaccctggtag
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