Clarias gariepinus (North African catfish): 128526684
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Entry
128526684 CDS
T10780
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00260
Glycine, serine and threonine metabolism
cgar00630
Glyoxylate and dicarboxylate metabolism
cgar00670
One carbon pool by folate
cgar01100
Metabolic pathways
cgar01200
Carbon metabolism
cgar01230
Biosynthesis of amino acids
cgar01240
Biosynthesis of cofactors
cgar04981
Folate transport and metabolism
Module
cgar_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
128526684 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
128526684 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
128526684 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
128526684 (shmt2)
Enzymes [BR:
cgar01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
128526684 (shmt2)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
128526684
NCBI-ProteinID:
XP_053354777
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Position
6:complement(21731963..21772239)
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AA seq
498 aa
AA seq
DB search
MLTLPMRYLVRPLCQRVSVNLRGQHSAAQRASDHDRPWTGQDSLAQDDPEMWELLKKEKD
RQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCQKRALA
AFELDPALWGVNVQPYSGSPANFAAYTAVLNPHERIMGLDLPDGGHLTHGYMSDVKRISA
TSIYFESMPYKLNPKTGLIDYDQMELTAKLFRPRLIIAGTSAYARLIDYARIKKLCTELN
AYLLADMAHISGLVAAKAVPSPFDHADLVTTTTHKSLRGARAGLIFYRKGVRSVDKKGAS
VMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALRQANTPMFREYIAQVMKNAKAMADALL
KKGYTLVSGGTDNHLVLVDLRPQGMDGARAERVLELASITANKNTCPGDKSALTPGGLRL
GAPALTSRQFKEADFERVVDFLDEGFKIALDVKKKTKKLAEFKSFLLEDPETVARIGDLR
SRVEAFARPFPMPGFSDH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgttgacactgcctatgagatatttagtcaggcctctgtgccagcgtgtgagcgtgaat
ctgagagggcaacactctgcagcacagcgggcgtctgatcatgatcgaccctggaccggg
caggacagcttggcacaggatgatcctgaaatgtgggagctgctgaagaaagagaaggac
cgacagtgtcgtgggctggagctcatcgcttctgagaacttctgcagccgagcagcactc
gaggcccagggctcctgcctcaataacaagtattcggaaggctacccaggaaagaggtac
tatggtggcgccgaggtagtggatcagatcgagctgctgtgtcagaagcgggctctagct
gcttttgaattggacccggcactctggggagtaaacgttcagccgtactcgggctctcca
gctaacttcgccgcctacacggctgtactgaatcctcatgagcgcatcatggggctagac
ctacctgatggaggacaccttacacatggctacatgtcagatgtgaagcgaatctctgct
acatccatctactttgagtccatgccctacaagctcaatcccaaaacgggtttgatagac
tatgaccagatggagctgactgcgaagctgttccggcccaggcttatcatcgctggcacc
agtgcttatgcccgcctcatcgactatgctcgcatcaagaagctgtgtacagagttaaat
gcgtatctgctggcagacatggcccatattagtggccttgtggctgctaaagctgttccc
tctccatttgatcacgctgacctcgtcaccacaaccacacacaaatccctgaggggagcc
agagccgggttgatattctatcggaagggagtgcgctccgtggataagaaaggtgcttca
gtgatgtatgaccttgaggacaaggtcaacttctcagtcttcccctctctccagggaggt
ccccataatcacgcaatcgctggggttgctgtggctctgcgacaggctaacaccccaatg
tttcgagagtatattgctcaggtgatgaagaatgccaaagccatggctgatgcactgcta
aagaaaggatacactcttgtgtcaggtgggactgataatcacctggtgctggttgattta
agaccacagggaatggatggagcacgtgctgaaagggttttggagctggcctccattaca
gccaataaaaacacctgccccggcgacaagagcgcactcacacccggaggcctgcgactg
ggtgccccagctctgacctctcggcagttcaaagaggcagactttgagcgcgttgtggat
ttcttggatgaaggctttaaaatcgctctagatgtcaagaaaaagaccaagaaattagcg
gagtttaagagcttcctgctggaggatcctgagactgttgcacggatcggtgacctgcgc
agtcgggtggaagcattcgctcggcctttccccatgccgggcttctccgaccactaa
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