Clarias gariepinus (North African catfish): 128526703
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Entry
128526703 CDS
T10780
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128526703 (sox21a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128526703 (sox21a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
128526703
NCBI-ProteinID:
XP_053354811
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Position
6:30295278..30296383
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AA seq
225 aa
AA seq
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MSKQAEHIKRPMNAFMVWSRAQRRRMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNPVKKERYRCTVAYNTGEQDALKGLLLNPEKTAAAV
ALLGHSAPTTPYPYLDMNSKMSELSATTFPHTLLDYSGRVVAFPRMGFLGGTHTHPSPGN
PGYMMPCNCPAWTPSSPHPLPLAYVLLPGMRKTLHEPYSSFAGAL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaagctgagcatataaagcgtccaatgaacgccttcatggtttggtcgcga
gcgcagagacggaggatggcacttgacaacccgaagatgcacaattccgagatcagcaag
cgtctcggcggagagtggaaacttctgtcagactcggagaaaagacctttcatcgacgag
gccaagcgtctccgcgcggttcacatgaaggaacacccggactacaagtacagaccgcga
cgcaagcccaagaatccagtgaagaaggagaggtaccggtgtaccgtggcgtataacacc
ggcgagcaggacgcgctcaaagggctacttctgaaccctgaaaagactgctgcagctgta
gccttgctcggtcactctgctccaaccaccccttacccttatctggacatgaactcgaaa
atgtcagaattatcagcgaccacatttccacacaccttgctcgattattctggacgcgtt
gttgcatttcctcgaatgggattccttggtggcacacacacgcatccctctccgggcaat
cctggatacatgatgccctgtaactgcccagcgtggacgccctcttcccctcaccctctt
cctttagcttatgtgcttttgccgggaatgcgcaagactctgcacgaaccgtactcttct
tttgcaggggccttatga
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