Clarias gariepinus (North African catfish): 128526742
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Entry
128526742 CDS
T10780
Symbol
si:zfos-323e3.4
Name
(RefSeq) volume-regulated anion channel subunit LRRC8E
KO
K22038
volume-regulated anion channel
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128526742 (si:zfos-323e3.4)
Ion channels [BR:
cgar04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
128526742 (si:zfos-323e3.4)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_6
LRR_EndoS
LRR_9
FTH
Motif
Other DBs
NCBI-GeneID:
128526742
NCBI-ProteinID:
XP_053354850
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Position
6:complement(33586058..33593774)
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AA seq
811 aa
AA seq
DB search
MIPVNEFRNIATEQNPRFRVLKPWWDVFSEYLCIAMLMMGVFGCTMQLTQEKISCLPDRI
TEDTDKSMDCSYLRNSRENESLWEYAITKNIAPNVVEVFGRKNDLDIHQYVYINSFCYET
AVHWYGKYFPYLVVIQTMIFMVASSFWFKFPGTSSKIELFVSILGKCFDSPWTTRAISEV
SEEREDMVTWRKNGTIKASAVESPDEEEEDKSAVFIRSTSVVSNRENNVLEPENATSVLD
KKEGEQAKALFEKVRKFQTHVEESDLLYLMYVLQTSLKVIKFAIITIYSGFLVSNIEIVV
TCRVPPSLTGFGLFCCNNNKAHLFAKLAYCYIGFVGVYGLLCIYCLYWLFHRPLKAYSFE
HVRLETGINDIPDVKNDFAFLLHLSDQYDPLYSKRFAVFLSEVSESRLSQVTLNHEWPIK
KLRTRLLRNSSDRLELHLFMLPGLPSTVFDVPEVESLKLEHVNNVIIPGTVTQLASLQEI
SLIHCPARLQLEALTFLRENLKVLRLTFGNIDQVPLWMYTLTNLEELHLSGPLTNELHRG
ASLETLRELKNLCVLTLRSKLTKIPSSVVDVGGQLLRLCVHNEGTRLHAFSSLKKLGNLA
TLELTGCELERLPSAIFSLTNLQQLDLKENRLTTVEEILSLQHCRRLCTLRLWHNSIRCI
PEHINKLRSLETLDLSWNKIQRLSLHLCYCTKLRHLDLSHNQLASLPPEIGILQSLRHLS
AAYNSLEVLPDELFSCKRLRTLELGNNRIAFLSPRVGNLAHLVCLELKGNRLESLPVEIS
DCNLLKLTGLTVEESLIDMLPSYVKDRMKER
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgattccagttaacgagttccggaacattgccacggaacaaaatccgcggtttcgagtt
ttaaagccatggtgggacgtcttctcggagtatctgtgcatagccatgctcatgatgggc
gtcttcggatgcaccatgcagctgacacaagaaaagatctcctgtctccctgatcgcatc
actgaagacactgataaaagcatggactgcagctacctccgaaattccagagagaatgag
agcctgtgggagtatgccattaccaaaaacatcgccccgaatgttgtagaggtgttcggc
cgaaagaatgacttagacattcaccagtacgtctacataaacagtttctgctacgaaact
gcagtgcactggtatggaaagtacttcccctacttggttgtcatccagaccatgatcttc
atggtagcaagcagtttctggtttaaatttcctggaacgtcatccaagattgagctgttc
gtatcaatcctggggaaatgctttgactccccctggaccactcgagcaattagtgaggta
tctgaggaaagagaagacatggtcacctggaggaaaaatggcacaataaaagcatcagca
gtggaaagtcctgatgaggaggaggaggacaaatctgctgtctttattcgttctacatca
gttgtgtctaaccgggagaacaacgtgctggagcctgagaatgctacatcagtcctggac
aagaaggaaggtgagcaggccaaggcgctatttgagaaagtgagaaaatttcagactcat
gtagaagagtcagacctcctttatctcatgtatgtcctccagacatcacttaaggtgata
aaatttgccattataactatttatagtggtttccttgtatcaaacattgagattgtggtg
acttgcagagtcccgcccagtctgactggttttggtttgttctgctgtaataacaacaaa
gcgcacctcttcgcgaagttagcgtactgttacattggatttgttggtgtatatggacta
ctatgcatatactgtctctactggctcttccatcggccactgaaagcatactcctttgag
catgtgcgtctggagacggggattaacgacatccctgatgttaaaaacgactttgcgttc
ctcttgcacctcagtgatcagtacgaccctctctactctaaacgctttgctgtctttctt
tctgaagtgagtgagagcaggttgagtcaggttaccctaaatcatgagtggcccatcaag
aaactccgcacacgtctcttaaggaactctagcgaccgcttagaactgcacctgttcatg
ttgccaggcttacccagcactgtcttcgatgtcccagaagtggaatctctgaagctggaa
catgtcaataatgtgattattcctggcacagtgacccaacttgcatctttacaggaaatc
tcccttattcactgtcctgccagacttcagctggaagcactcaccttcctacgggagaac
ctgaaagtcctacgcctcacctttggcaacatagatcaggtccccttgtggatgtacact
ttaacaaatctggaagagttacacctaagtgggcctctcaccaatgagctccatcgtggt
gcctctctagaaaccttacgggagctcaagaacctttgtgtactgacattgcgtagtaaa
cttaccaagatcccttccagtgtggtggatgtaggtggacagctcttaagattatgtgta
cacaatgaaggcaccaggctgcatgccttcagcagtctaaagaagctggggaacttggcc
acacttgagctgactggctgtgaacttgagcgtctccccagtgctattttcagcctcacc
aacctgcaacagttggatctaaaggagaacaggcttaccaccgtggaggaaattcttagc
cttcagcattgtcgccggctgtgcacactcaggctgtggcacaactccattcgctgcatc
cctgaacacatcaacaaactgcgctctcttgagacactggacctgagttggaacaagatt
cagaggttgtcgctgcacctgtgctactgtaccaagcttcggcacctggatctctcccac
aatcaactcgcctcactgccccctgagattggtatcctgcagagtctgcggcacctttct
gcagcttacaactcgttggaagtgctcccagatgagctgttctcatgtaaaaggttgagg
actcttgagctggggaataacagaattgcctttttgtctccaagggttgggaacttggcc
cacttggtgtgtctggaattaaaggggaacaggctggagtctttgcctgtcgagataagt
gactgcaacctcctaaagttgactggactgactgtagaggagagtctgattgatatgttg
ccttcttacgtaaaagatagaatgaaggaaaggtga
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