Clarias gariepinus (North African catfish): 128526796
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Entry
128526796 CDS
T10780
Name
(RefSeq) claudin-18-like isoform X1
KO
K06087
claudin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03272
Virion - Hepatitis viruses
cgar04382
Cornified envelope formation
cgar04514
Cell adhesion molecules
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128526796
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128526796
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128526796
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128526796
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128526796
04147 Exosome [BR:
cgar04147
]
128526796
04515 Cell adhesion molecules [BR:
cgar04515
]
128526796
Cilium and associated proteins [BR:
cgar03037
]
Other cilia and associated proteins
Stereociliary proteins
128526796
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
128526796
Exosomal proteins of colorectal cancer cells
128526796
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
L1 family
128526796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
L_HMGIC_fpl
Trp_oprn_chp
DUF6223
Amastin
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
128526796
NCBI-ProteinID:
XP_053354923
LinkDB
All DBs
Position
6:14091373..14094723
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AA seq
255 aa
AA seq
DB search
MAVTLCQVMGFVLGLLGLGGVIAATGMDMWSTEDLYDNPVTSVYSYSGLWRSCVRQSSGF
TECRPYFTILGLPGLFQGVRALMIVAIVLGVIGALIAIFALKCLRMGNMEDRVKATMTLT
SGVMFVIAGVCGIAGVSIFANLIVTNFALTTFTSPNGLGLVGSGLVGSPLTPRYTFGSAL
FVGWIGGGVLFVGGIMLCLACRGLMPEKRYEGTAYKPASQSAIYRSEGYNKPYPNSSYKA
HSMEGRQSNQRFDYV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacattgtgccaggtgatgggctttgtgctgggccttttgggactggggggt
gttattgcagctactggcatggacatgtggagtacggaggatctgtacgacaaccccgtt
acatccgtctacagctactcgggactgtggaggtcgtgtgtaagacaaagctcaggattc
actgagtgcagaccctatttcactatcctgggacttccaggcctcttccaaggggtgaga
gcgctcatgattgtggccatcgttctcggggttatcggagccctcattgccatttttgcc
cttaagtgcctcagaatgggcaacatggaggaccgtgtgaaagcgaccatgacgctgact
tcaggggtcatgtttgttattgctggggtttgtggcattgctggagtttccatctttgcg
aatttgatcgtgaccaactttgcgctcactacctttacctcacctaatgggttgggtcta
gttggctctggtctcgttggctcacctcttactccaagatacacattcggctcggcccta
tttgttggttggatcggaggaggtgttctgtttgtcggtggaattatgctgtgtttggcc
tgtcgtggactgatgcctgagaaacgctatgaaggaacggcatacaaacctgctagccag
agtgctatctacagatcagaaggctacaacaagccttatcccaacagctcctacaaggca
cacagcatggaaggcagacaatctaaccaaagatttgactatgtgtga
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