Clarias gariepinus (North African catfish): 128527019
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Entry
128527019 CDS
T10780
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
128527019 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
cgar04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128527019 (lrrn1)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_1
LRR_EndoS
ig
Ig_2
LRR_Zer-1
V-set
fn3
Pur_ac_phosph_N
LRR_NXF1-5
Ig_C17orf99
Sp38
LRRNT
Motif
Other DBs
NCBI-GeneID:
128527019
NCBI-ProteinID:
XP_053355259
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Position
6:complement(25910685..25926159)
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AA seq
715 aa
AA seq
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MAIATAFCVAQPCFIFLLALLTFSSVEATECPQLCVCEIRPWFTPQSTYREAITVDCNDL
HLTRIPGNLSSDTQVLLLQSNYIARTSEELEQLLNLTELDLSQNNFTNIHDIGLTNMSQL
TTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNKLKA
IDSHWFESTPNLEILMIGENPVVGISDLNFKPLVNLRSLVLAGMELTDIPDNAFVGLDNL
ESLSFYDNKLVNVPQSALQKLPNLKFLDLNKNPVHKIQEGDFKNMLRLKELGINNMGELV
SIDRFALDNLPELTKLEATNNPKLSYISRLAFRDVPSLESLMLNNNALNSIYLATVESLP
NLREISIHSNPLRCDCVIQWMNSNKTTIRFMEPLSMFCAMPLEVRGQHIREVLSQESAEQ
CLPMISHDSFPNHLNLDIGMAVDLDCRAMAEPEPEIYWVTPLGNKVMMDTVSDKYHLNSA
GTLHISNIQADDSGRYTCVAQNTEGADTRVTAIRVNGTLLDSTQLMKIYVKQTESHSILV
SWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCLSVSNI
HQQTQKSCVNVTTKHSTFAVEISDQGTNTAFAAVMGTILAIISLGFISVYIAKRWKRKNY
HHSLKKYMQKTSSIPLNELYPPLINLWDVDTEKDKDGSLEPKPSQVDTTRSYYMW
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggctatagctactgcattctgtgttgcacagccctgttttatttttctcctggcgtta
cttacattctcttctgttgaagctacagaatgtcctcagctatgcgtatgtgaaatccgg
ccatggttcacaccccagtctacctacagggaagctataactgtagactgcaatgacctt
catcttacacgcatccctggaaatctgtcaagtgacacacaggtgttgctattgcaaagt
aattacattgccaggaccagcgaggaactggagcagttgctaaaccttactgaactggat
ctttcccagaacaactttaccaacattcacgacataggcctgaccaacatgtcccagctc
actacactccatttggaagagaaccagattgttgagatgcctgacttcagtcttcaggac
cttacaaacctccaggagctttatataaaccacaatcaaattagttccattgcacctaat
gcgtttgctggtttgcgcaacttgctaaggctacacctgaactcaaacaaactgaaagcc
attgatagccactggtttgaatcaacccctaaccttgagatcctaatgattggggaaaat
cctgtagttggtatttcggatttgaattttaaacctcttgttaaccttagaagtttggtt
ttagcagggatggaacttactgatatacctgacaatgcctttgttggactggacaatctt
gagagcctctctttctatgataataaacttgtaaatgttcctcaaagtgctctgcagaaa
ctaccaaacctgaaattcttggatttgaacaaaaaccctgtgcacaaaatccaagagggg
gactttaaaaatatgttgaggcttaaagaacttggtattaataatatgggcgaacttgtg
tctattgatcgttttgcgctggataatctcccagaattgaccaaacttgaggccaccaat
aaccctaagctctcatacattagccgtttagcattccgtgatgttccatctcttgagagt
ctcatgcttaacaacaatgctctgaactccatttatctggcaacggtggaatctttaccc
aatttgcgagaaatcagcattcacagcaacccactgcggtgcgattgtgtaatccagtgg
atgaattcaaataagacaacaataagatttatggaacctctttcaatgttctgtgcaatg
ccacttgaggttagaggtcagcacataagagaggtactctcacaagaatctgctgagcag
tgtttgccaatgatatcccatgatagcttccctaaccatcttaacctggatattggcatg
gctgtagaccttgactgtcgtgcaatggcggagcctgaaccagagatatactgggtaaca
ccattaggtaacaaggtcatgatggatactgtgtctgataagtaccacctgaacagtgct
ggaacactacatatatcaaacattcaggctgatgattctggtcgctatacctgtgttgct
cagaatacagagggtgctgacactcgggtgactgcaatccgggtcaatggtactctcctg
gacagcactcagcttatgaaaatttatgtcaaacagacggagtcccactcaatactggtg
tcctggaaggtaaactccaatgtaatgacttctaacctcaagtggtcttcggccaccatg
aagattgacaaccctcatattacctacacagccagagtccctgtagatgttcatgagtat
aatctgacacaccttcaaccagctactgaatatgaggtctgtctctcagtttctaatatc
caccaacagactcaaaagtcttgtgtaaatgtcacaacaaaacattcaacttttgctgtg
gaaatatctgaccaaggcactaacacagcttttgctgctgtcatgggtacaattctggct
attataagtctggggttcatctctgtctacattgccaagagatggaaaaggaagaattat
caccactcgctcaagaagtacatgcagaaaacctcctccattccccttaacgagctatac
cctcctctaatcaatctgtgggatgttgacactgaaaaggacaaagatggatccttagag
ccgaagccgagccaggtcgacacaacaagaagctactacatgtggtga
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