Clarias gariepinus (North African catfish): 128527028
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Entry
128527028 CDS
T10780
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04382
Cornified envelope formation
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128527028 (lamc2)
04518 Integrin signaling
128527028 (lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128527028 (lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128527028 (lamc2)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_B
EGF_laminin
EGF_LMN_ATRN
DUF7260
OHCU_decarbox
CFAP141
FemAB_like
Motif
Other DBs
NCBI-GeneID:
128527028
NCBI-ProteinID:
XP_053355271
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All DBs
Position
1:complement(44778418..44790038)
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AA seq
1110 aa
AA seq
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MNSAWIFLCAICIWHPVQGTYPSTGCTCNGKALYCVRDSLGLRCANCQDNTEGRHCESCT
EGYFHQRAGEGCLPCSCNPVGSEGPGCDSQGQCVCKQGAQGAKCDLCANGSPITANGCAS
LQQKTCFCNGHSNECSQAQGYSVYNIISTFDQGMDGWKVITAPSVSPSHVEYRWSPAHHS
TEVYSSDVLPVYLSAPAQYLGNQVLSYGQTLSFVLRLSRGVRYPSTSDVVLEGSGLTVSA
PLGNMRSAIPCGKKITYTFRLDEQPSSKWKPQLSAQAFQTLLSNLTAIKIRATFGEGGRG
YLDDVVLVSAQLGPGSPAFWVEKCRCPTGYEGQFCERCAAGYKRRFPEQGVRSQCEPCAC
LGGSCDPETGDCYSADETSTGQVCDTGYYSDPELPGACKKCPCSTGQTCSLIPGTLRVKC
KCPSGTTGSRCQKCIDGFYGDPLGESGVQRPCQRCHCNGHLDLNAVGNCDPLTGECFKCL
NNTTGFQCEKCLEGFFHSKAGDSCRACKCNPKGSISSLCNDLGQCKCKEGFNGPKCVKST
CPSCFNPVKSQIQMYVKKLQQVEALFNEVGNGGVDITSAMEEAISTAEQMVKTVESETDS
LIEAEKNLQAQLLAIGGRQLQDEKKVQNLSKIVEKVVWHERQYQREVADIQKLISDIRQN
LQKAKQDIQAVDIPLRDAVPGTNFVSDLVQKANDLAQKHMGQAASVEQTAKSSLLESENA
LALMRNVISGENKVREQLNGLRTQYDADMDLVNAMNKQAARVSNAAETESSVALGTLKQI
ADLEKNLPKVPKDITGLVASLDGLKKSYGNDVSGFLELQEQFGADQKEAVDLMNQLKGAQ
EVQNNLLARANIAKGDADKALTLFNNLGSVDQALEKLKGFETQIDNSKALADDALSKLPM
ISEIIKTAVVNNDKTQGILDQMVDYSDTFNNLNLSLAKLEKLTGSLPPSTDLLKTASTLR
GGLEGLNSQADAAMKKLLNEKTNAERDLKQAEEVEWGASGAYINANLTRDAVGDALHTVN
NLLGLLGKPGAVDEKKVSDLEKAIATSRRRVDTELRPRLKDLEDKEALQKASIARMINDI
DTILADIDNLEHIYRTIPDGCYNTPPIERA
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcgcgtggatctttttgtgcgcgatctgcatctggcatccggttcaaggaact
tatccatccacgggctgcacatgcaacggaaaggctctgtactgtgtgcgcgactccttg
ggcttgcgctgtgcaaactgccaagacaacactgaaggccggcactgtgagagctgtacg
gaaggatacttccaccagagagctggagagggctgcctgccctgctcctgcaaccctgta
ggctctgagggcccaggatgtgacagtcagggacagtgtgtgtgtaagcaaggtgctcag
ggggccaagtgtgacctctgcgctaacggatctccaatcacagccaatggttgtgcatcg
ctgcagcagaaaacctgtttctgtaacggtcattcaaatgagtgctcccaagcccagggt
tactcagtttacaacatcatctcaacatttgatcaagggatggacggctggaaggtcatc
actgctccaagcgtgagtccgtcccacgtggaataccgctggtctccagcacaccacagc
actgaggtctactcttcagatgtgttacctgtttacctgtctgctccagcccaatatctc
ggaaaccaggttctgagctacggtcagactctttccttcgttctccggctgagccgagga
gttcgctatccttctacctcagatgtcgtgttagaaggctctggactgacggtttctgct
ccgctgggaaatatgagatctgccattccctgtggaaagaaaatcacctacactttcagg
ctagacgaacaacccagcagcaaatggaaaccccagctctcagcgcaagcatttcaaacc
cttttgagcaacctcacagccatcaaaatccgagccacttttggtgaaggaggacgtggt
tatttggacgacgtcgttctggtctcagcccagttgggtcctggctcccctgcattctgg
gtggagaagtgccgttgtccgacaggttacgaaggacagttttgtgagcgctgtgctgct
gggtataaaagacgcttcccagaacagggtgtccgtagccagtgtgagccatgtgcctgt
ctgggaggaagctgcgatcctgaaacaggggactgctactcagctgatgagacttctact
ggacaagtctgtgatactggttactacagcgaccctgagcttcctggggcctgcaagaag
tgcccatgctccacagggcagacctgttcgctcattccagggaccctaagagtaaaatgt
aaatgcccatctgggaccacaggctctcggtgccaaaagtgcatcgatggtttctatggc
gatcctcttggagagagtggagttcagcgaccctgccagcgctgtcactgtaatgggcac
ttggacttaaatgccgtgggcaactgcgaccctttaacgggggagtgtttcaaatgcctg
aacaacaccacaggctttcagtgtgagaagtgtctggagggattctttcacagcaaagct
ggcgattcatgtcgagcttgtaaatgcaacccaaagggatcaatctccagcttgtgcaat
gatctaggccagtgcaaatgtaaagagggttttaatggaccaaagtgtgtcaaatccaca
tgcccatcatgcttcaacccggttaagagccagattcagatgtatgtgaagaagctgcag
caggtggaagctctttttaatgaagtggggaacggtggtgtggacatcactagtgccatg
gaggaagcaatcagcaccgctgaacaaatggtcaagactgtggaaagtgaaacagactca
cttattgaggcagagaagaatcttcaagcccagctgttagccattggcggccgtcagttg
caagatgagaaaaaagtccagaacctctcgaagatcgtagagaaggttgtctggcacgag
cggcaatatcagagagaagtggctgacatccaaaaactcatcagtgatattaggcaaaac
ctgcaaaaggccaaacaggacatccaggcagtcgacatccccttgcgtgatgcggttcca
ggcacaaacttcgtgtctgatttggttcagaaagcaaacgatctcgctcagaagcacatg
ggtcaagcagcttcagtggagcagacagcgaagagctctcttttggagtctgagaacgct
ctggctcttatgcgcaacgtaatcagcggagaaaacaaagtgagagagcaacttaatggc
ctcaggacgcagtacgatgcagatatggacctggtcaatgccatgaacaagcaggcggct
cgtgtgagtaacgcagcggagacagaaagctcagtggcactgggtaccctgaaacagatc
gctgacctggagaaaaaccttccaaaggttccaaaggacatcactggcttggttgcctca
cttgatggtctgaagaaatcctacgggaatgacgtgtcagggttcctggagctgcaagag
cagtttggggctgatcagaaagaagcagtggatctaatgaatcagctcaaaggcgctcag
gaggtccagaataacctgcttgccagggccaacattgccaaaggagatgcggataaagct
ctgactctctttaacaatctgggcagtgtggatcaagctctggagaagctcaaaggattt
gaaacccagatcgataatagtaaggcgctggctgatgatgctctcagtaaactgcctatg
attagtgaaatcattaagacagctgtggtcaacaatgacaagacccagggcattctggac
cagatggttgactacagtgatactttcaacaaccttaacctctctctggccaaactggag
aaattgacgggttccctgccgccctcgactgatcttttgaaaacagcttcgacactaagg
ggaggtctggaggggctaaacagccaagcagacgcagccatgaagaaactgctgaatgag
aaaacaaatgcagagagagacctgaagcaagctgaggaggttgaatggggggccagtgga
gcatatattaatgcgaatctcactagagatgctgtcggagatgctttgcataccgttaat
aaccttttaggattacttggaaaaccaggagctgtagatgaaaagaaggtgtcggatctg
gaaaaggctatagctacaagccgtagacgtgtagatacagagctcaggcccaggctcaaa
gacctagaggacaaagaggctttgcagaaagcttccatcgctcgcatgatcaacgatatc
gacaccatcctggctgacatcgacaacctcgagcacatttaccgaaccattccagacggc
tgctataacactccgcccatcgagagggcttag
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