Clarias gariepinus (North African catfish): 128527110
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Entry
128527110 CDS
T10780
Symbol
cyldl
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04217
Necroptosis
cgar04622
RIG-I-like receptor signaling pathway
cgar04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128527110 (cyldl)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128527110 (cyldl)
04625 C-type lectin receptor signaling pathway
128527110 (cyldl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128527110 (cyldl)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128527110 (cyldl)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128527110 (cyldl)
Peptidases and inhibitors [BR:
cgar01002
]
Cysteine peptidases
Family C67
128527110 (cyldl)
Ubiquitin system [BR:
cgar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128527110 (cyldl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Prok-RING_2
zf-HIT
Motif
Other DBs
NCBI-GeneID:
128527110
NCBI-ProteinID:
XP_053355388
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All DBs
Position
6:complement(9914221..9928056)
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AA seq
766 aa
AA seq
DB search
MASRDTNDYFIITAKPTYGWVTPGNICYIKEKHYSTRKPQKKDTVPVMRIGGTIDYNLPY
DILQPLTRKRSEFLLAIESCTDRLREVAHPEALDQAVEINEGSDVLVEQNTQWLKGVVRY
IGPLSEPSLLDPIAAVFFGVELQGEDEGKGQNDGSYRYKPLFKCQKDCGIFVPFTRIRLL
HPKPSVPWPSIQDNPAMKLSVGDRITYILDDKSVCQHGMVLSPMKDGMILISTDVDEHGN
AGGERKIPWHCVIKEDDVNTDEWQKCKSERMDISENRDTAQDSGADGAIKVGSTVMVNLA
TGPAYGTVRWTGSLPNMSSSMAGLELEYPCGVSDGTFKDVRYFTCPPKHGLFVKVSSCQP
GDRFLGDTAVNGHFDRDKEDIAVPPLRSEDVMAVLNGRMKGVQGHCNSCYMDAALFSLFS
CSSVLDSLLFKKTKRIDEPIQKTLLRDIVCPLRRKGFVQAQSVMKLRKQVKERGHCPSYT
TDEKDPEEFLTLLMQDILSLEPLLKLKSCDQPKGVTELEQTSYLYQIFMDYNHSLVLPTV
QQLLEHSFYNNGIKLAEVPSCLILTMPRSGKQFKMFPKIIPSLQLDITALLSNGLQQCVV
CGQLAHVECSQCFTDSVFSHTGLKVFCNNCSSKVHLHPRRQFHKPSSLHLPEGFSYSQSL
EHTLPREKLELFAVLCIETSHYVSFVKYGPKITDWIFFDSMADRKGETDGFNIPEVKACP
EVARYLNMPLAELAKQVPREMDGVAKRLFCDGYMYLYQSPSMALYR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccgtgatactaatgactacttcatcatcactgcaaaacccacatatggctgg
gtcacaccaggaaatatatgctacataaaagagaaacattattcaactcgaaaacctcaa
aagaaggacactgtacctgtgatgcgtatagggggcacaatagattataacttgccctat
gatattctgcagcccctgacaaggaaaaggtcagaatttcttttggcaattgaaagttgt
acagacagactaagggaagtggcacaccctgaggctttagatcaagctgtggaaataaat
gaaggctcagacgtcctagtagagcaaaacacccagtggcttaaaggcgtggttagatac
atcggcccgctctccgagccgagtcttttggatcctattgcagcagtattttttggagtg
gaactgcaaggagaagatgagggcaaagggcagaatgatggaagctacaggtacaaaccc
ctctttaaatgtcagaaagactgtggcattttcgtccctttcaccagaatcagactactg
catcccaaaccgtcagttccatggcctagcatccaagacaatcccgccatgaaactttct
gtcggagatcgcataacctacatccttgatgataaaagtgtctgtcagcatgggatggtc
ctgagtcctatgaaagacggcatgattttgatctcaacggacgtagatgaacatggaaat
gctggaggagagaggaaaattccctggcattgcgttattaaagaggatgatgtcaataca
gatgagtggcagaaatgtaaatcagaaaggatggacatttctgaaaatcgagatacagct
caggattcaggagctgacggggctataaaagtgggttccacagtgatggttaatctggct
acaggacccgcctatggaacagtgcgttggactggttctcttccaaacatgtctagcagc
atggctggcctggaactggaatatccatgtggggtgagtgacgggacgttcaaagacgtt
cggtatttcacatgtccaccgaagcacggcctcttcgtgaaggtctcatcttgtcagcct
ggtgatcgtttcctgggtgacactgcagtaaacggacattttgaccgcgataaagaggat
atagccgtcccacccctgaggtccgaggacgtgatggcggttctgaatggccggatgaag
ggggtccagggtcactgtaactcctgttacatggatgctgctctctttagtttgttttcc
tgctcatcagtactggactctcttctgtttaaaaagactaaacgtatcgatgaacccatt
cagaaaactcttttaagggacatcgtgtgtcctctacgcagaaagggttttgtccaggca
cagagtgtaatgaagcttcgaaagcaggtaaaggagcgaggccactgtcctagctacacc
acggatgagaaagatccagaagagtttcttactctcctcatgcaggacattctgtcactg
gagccactactgaaactgaaatcatgtgatcagcctaaaggtgtaacagagctggagcag
acaagttacttgtaccaaatcttcatggattacaaccacagtctggttttaccaacagtg
cagcagctgctcgagcattctttctacaacaacggcatcaaactagcagaggtgccttct
tgcctgatcctgacaatgcctcgctctgggaagcagtttaaaatgtttcccaaaatcatt
ccctcactgcagctagatatcactgctcttctgtccaacggtcttcagcagtgtgtggtg
tgtggacagctagcccatgtggagtgtagccagtgcttcacagattcagttttcagccat
acaggattaaaagttttctgtaataattgttcatccaaggtccaccttcacccccgccga
cagtttcataaaccatcatccctgcatctccctgaaggattcagttactcgcagagtctg
gaacacactcttccacgagagaaactagagctgtttgctgttctatgcatagagactagc
cactatgtttcttttgtcaaatacggaccgaaaataaccgactggatcttttttgatagc
atggctgaccgaaaaggtgagactgatggcttcaacattcctgaggttaaagcatgtccg
gaggtggcacgctacctcaatatgccactagctgagctggctaagcaggtaccccgtgaa
atggatggtgtggcaaaaagactcttctgtgacggctacatgtacctgtaccagagcccc
agcatggctttgtatcgctga
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