Clarias gariepinus (North African catfish): 128527396
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Entry
128527396 CDS
T10780
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128527396 (chd2)
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
128527396
NCBI-ProteinID:
XP_053355695
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Position
7:complement(22819266..23006034)
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AA seq
1804 aa
AA seq
DB search
MLKSKDKKEGNDASTQSNASSSCTSEGSNRSASDTGSQSETEQGSERAHTQHSESNSTSE
SESCSESGSESAGSKSRQTIEEIKEKRVKKRDLADVKKMWEAHPDVYGVRRSNRSRQEPA
RLNIGAEGSSESESESHKRKVSRQKTKENTWKDDSNGEDDGEEEPSSSESEPEEKKVRSR
RLPARRPQAKSSTTKQYQSLKGQKQRKQETSDEEEEDDDDDDDDDDDEDTPKRQTRRRAA
TKISYKEDQHDFETDSDDLIEMAEGTEDVQDDDSKTIEKVLDTRIGKKGATGTATTPYAE
EANGEPRVDFEPEMDELETQFLIKWKGLSYVHNTWESVDSLTQQKAKGVKKLENFRKKNE
ELSAWLKKASPEDLEYYNCQQELTNDLNKQFQIVERVIAVNTGKSHMPPDLPSQKTTSNE
PEYLCKWMGLPYAECTWEDGSLIGKKFQLCIDSFNNRNVSKTMPSKDCKVLKQRPRFVAL
KKQPSYIGDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQH
QLYGPFLLVVPLSTLTSWQREFSTWAPDMNVVVYLGDVLSRKTIRDYEWIHQQTKRIKFN
TLLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQ
NSLKELWSLLHFLMPDKFELWEDFEEEHGKGRDNGYHSLHKVLEPFLLRRVKKDVEKSLP
AKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFLIKQ
PDEGENETPQEHLHALVRASGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILADYLAMK
RYPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN
PQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTI
LDNTSGNSNSNPFNKEELAAILKFGAEDLFKEPEGEESEPQEMDIDEILRLAETRESDQG
SSATDELLSQFKVANFTMDESTPELEEKPMRNWDEIIPEDQRRRVEEEEKQKEMEDIYML
PRSRSSNKKAQANDSDSDVGSKLKLKSQSSGSESETDDSEDDKKPKRRGRPRARKNNVEG
FTDAEIRRFIKAYKKFGAPLERLEAIARDSELVDKSIADLKRLGELVHTTCVAAVQEHEE
QLKDNPTEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKVVPSNPVERSKFQLSC
RVKMPHFDIDWDVQDDTHLLLGIYEHGYGNWDQIKTDPELKLLDKILPDNPDKKPQAKQL
QMRADYLLKLLKKEQESKDASKADEESQVKKRKPRVKKDKTRPELASEISSPHLSEHTSE
EGEVKDDKAEKSPAKKKQKKDNKENKEKQGTVKKDKEGDKDKRRAKLRKDKIKSGGKSKK
TQGPVHITAGSEPVPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQH
TRACLLKIGDRITECLKAYSDPEHVKTWRRNLWIFVSKFTEFGAKKLHRLYKMAQKKRCQ
EEEKEHRKKDDPARKKPFRPEPSGSSWDSTGTQPSSKPHPIQNLPTGPPSHSHHRELYNQ
HKRHFSKDYRGDWQRERKYTYPGNSNQPWQGDRHHSYDQHRYKEHHYSNRRAHSDLYRSS
GFRNQASARKRVYDQYSNDRDHRDHRDYYDRHPDPKRRRTDDYRSANYHQGGGGGGYSQD
FRRVADHRGVMGPDHYRAFHPDKPPPLLDPRSPQVLKSPLESLSPLERTMEPKPNPDLNW
NRKT
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagagcaaggacaaaaaggaaggaaacgacgcttcgactcaaagcaatgcctcg
agcagctgtacatcagaggggtcgaatcgttcggcctcagatacaggcagccagtctgag
actgagcagggcagtgaacgtgcacacactcagcattccgaatccaacagcacgtctgag
tccgagagctgctctgaatctggtagtgaatcggctgggtcgaagtcacgccagaccatt
gaagagatcaaagagaaacgggtcaagaagcgagaccttgctgatgtgaaaaagatgtgg
gaggcacatccagatgtttatggtgtcagaaggtccaatcggagcagacaggagcctgct
cgtctaaacattggagcagagggcagcagtgagtctgaaagtgaaagtcacaaaagaaaa
gtatcccgacagaaaactaaagaaaatacctggaaagatgactcaaatggtgaagatgat
ggtgaggaagaacccagcagttcagagagtgagccggaagaaaaaaaagttagatccagg
cgacttcctgctagaagaccacaggccaaatcatccacaacgaagcagtatcagtctcta
aagggacaaaaacagagaaagcaggaaacatcagatgaggaagaggaggatgacgatgac
gacgatgatgatgatgatgatgaagatactcctaagagacagactcggcgaagagcagca
actaaaattagttataaggaggaccagcatgattttgaaactgactctgatgacctgata
gaaatggctgaggggacagaggatgtgcaggatgatgacagtaagactattgagaaagtc
ttggataccaggattggcaagaaaggagctactggaacagcgaccacaccatatgctgaa
gaggccaacggagaacccagagtagattttgagcctgagatggacgaactcgagacacag
ttccttatcaaatggaagggcttgtcttatgtccacaacacttgggaaagtgtggactcg
ctcactcagcaaaaggcaaaaggggtgaaaaaactggaaaactttaggaaaaaaaatgag
gagctcagtgcttggttaaaaaaagcctcacctgaggatttggaatattacaactgccag
caagagttaaccaatgatctgaataagcagtttcagatagtggagagagtcattgcagtg
aacacagggaagtcacatatgccccctgatttaccgtctcagaagactacatctaacgag
cctgagtacttatgcaagtggatgggtctgccctatgcagagtgcacttgggaagatggt
tcattaataggaaaaaagttccagttatgcattgatagttttaacaacaggaatgtctct
aagactatgccctccaaagactgtaaggtgttaaaacagaggcccagatttgtggctctt
aagaagcagccgtcttatattggagatgagaacttggagctgagagattaccagttagat
ggggtgaactggcttgcacactcttggtgcaggtgtaacagtgttatcttagctgatgaa
atgggcctggggaagaccatccaaacaatttcattcctttcctacctgttccatcagcac
cagctgtatgggcccttcctcttggttgtgcctctctccacactcacgtcttggcagcgg
gagttcagtacttgggctcctgacatgaacgtagtggtctatttgggggatgttttgagc
agaaagacgattcgtgattatgagtggattcaccagcagaccaaaagaataaagttcaac
acacttttgaccacatatgaaattctactgaaagataagggtgtcttgggaaacataaac
tgggcatttctcggggtggatgaggcccaccggctgaagaatgatgactctcttctgtat
aaaacactaatagattttaggtccaaccacaggctgctcataacaggaactccgctgcag
aactcactcaaagagttgtggtccctcctgcactttcttatgcctgacaagtttgagttg
tgggaggattttgaagaagagcatggtaaggggagagacaatggctaccatagcctgcat
aaagtgcttgagcctttccttttgcgtcgtgtgaaaaaggatgtggaaaaatcgctgcct
gccaaagtggagcagatcctcagagttgacatgtctgcccaacagaaacagttttacaaa
tggattctcacaaggaattataaagccctatccaaaggcaccagaggcagttcctcagga
ttcctcaacatcgtcatggagctgaagaaatgctgtaaccatggtttccttatcaagcag
ccagatgagggagaaaatgagactcctcaggagcatttgcacgcccttgttcgtgccagt
ggaaagcttgtgctcttggacaaattgctaacaaggttgagggaacgaggcaatcgtgtg
cttatcttttctcagatggtccgtatgctggacattttagctgattatctggctatgaaa
cgctatccctttcagagattagatgggtccatcaagggagaacttcggaaacaagcactc
gaccactttaatgcagagggttcagaggacttctgtttccttttgtctacacgtgctgga
ggtctgggtattaacttggcctcagccgatactgtagtcatctttgactctgactggaac
cctcaaaatgacctgcaggcccaggccagagcccatagaataggccaaaagaaacaagtg
aatatttatcgactagtcacaaaaggcactgtggaggaggatattatagaaagggcaaag
aaaaagatggtgctggaccatctcgtcatacaaaggatggacaccaccggacgaacaata
ctagacaacacttcgggcaattcaaattcaaatccatttaacaaggaggagctggcagcc
atattgaagtttggtgcagaagatctgtttaaagaaccagaaggagaggaatcagaacca
caggaaatggacattgatgagattttgagacttgctgaaacaagggaaagtgaccaaggt
tccagtgccacagatgagcttctgtcccaatttaaggtggctaacttcaccatggacgag
agtacaccagagctggaggagaagcccatgcggaactgggatgagatcattccagaagat
cagagaagacgggtggaagaggaggaaaagcagaaggagatggaagacatttacatgttg
ccacggagcagaagctcaaataaaaaagcacaggcaaatgacagtgacagtgatgttggt
tcaaagctcaagctgaagagccagtcatcaggttctgaaagtgagacagatgacagtgaa
gatgataagaagcctaagcggcggggtcggccacgtgcacgtaaaaacaatgtggagggc
tttacagatgctgagattcgcaggtttataaaagcttataagaaatttggtgctcctctt
gaaaggttggaggctattgcacgtgactctgagctggtggacaaatccatcgcagattta
aagcgactaggagagctggttcacacaacatgtgtagctgcagtacaagagcatgaggaa
caattgaaggataaccccactgaagccaaaggcccaggaaaaaggcgtggcattaacatc
aagatctctggggttcaggtaaatgctaaatccatcattcagcatgaggaagagtttgag
cctctgcataaggttgtgccctccaatcctgtcgagaggagcaaatttcagctaagctgt
cgtgtaaagatgcctcactttgatatagattgggatgtacaggatgacacacatctgttg
ttgggcatttatgagcatggctatggcaactgggaccaaatcaaaactgatcctgagctg
aaacttttggacaagattcttccagacaaccctgacaaaaagccacaggccaagcaactg
caaatgagagctgattacttgttgaagcttttgaagaaggaacaagagagtaaggatgca
tctaaagcagatgaagaatcccaggtaaaaaaaagaaaacctcgagtaaagaaagacaag
acacgacctgaactggccagtgaaatttcatctcctcatctctctgaacacacttcagag
gaaggtgaagttaaggatgacaaagctgaaaaatcacctgcaaagaaaaaacagaagaag
gacaacaaagagaacaaagaaaaacagggcactgtaaagaaagacaaggaaggggacaaa
gacaaaagacgggcaaagctgaggaaagacaagataaaatcaggagggaaaagtaagaaa
actcagggaccagtgcacattacagccggcagtgagccagttcctattggggaggaggat
gatgaactagaccaggaaacgttcagtatttgtaaagagcgaatgaggccagtgaagaag
gctcttaaacaactggataaacctgatgaaggcctgtcggtgcaggagcagctgcagcac
acacgtgcctgcctgttgaagattggagatcgaatcacagagtgccttaaagcctacagc
gacccggaacacgtcaaaacctggcgcagaaatctctggatttttgtatccaaattcacg
gagtttggagcaaagaaactgcataggctgtacaaaatggctcaaaagaaacgctgtcaa
gaggaagagaaagagcacagaaagaaagatgacccggccagaaagaagccatttcgtcct
gaaccttctggatcgagttgggactccactggcacacagccttcatccaaaccacaccca
atacaaaatcttccaacaggacccccatcccactcacaccaccgtgagctctacaaccag
cacaagagacacttctctaaagattatcggggagattggcaaagggaacgtaaatatacc
tacccaggaaacagtaaccagccatggcaaggtgaccgacatcactcttatgatcagcat
cggtataaggagcatcactacagcaaccggcgggcacactcagacctgtaccgcagtagt
ggcttccggaaccaagcctcagcccgtaaacgggtgtatgatcagtacagcaacgatcga
gatcatcgcgatcaccgtgactattatgacaggcatccagacccaaagaggagacgcaca
gatgactaccgctctgcaaactaccaccagggaggaggtggagggggctatagtcaggac
tttcgaagggtggctgatcatcggggtgttatggggcctgatcattacagggcatttcac
cccgacaaaccccctcctctgcttgacccacgctcacctcaggtgctgaaatcgcctctt
gagtctctctctcccttggagagaaccatggaacccaaacccaacccagatcttaattgg
aacaggaagacatga
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integrated database retrieval system
