Clarias gariepinus (North African catfish): 128527413
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Entry
128527413 CDS
T10780
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128527413 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128527413 (snrpa)
Spliceosome [BR:
cgar03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
128527413 (snrpa)
Complex B
128527413 (snrpa)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
128527413
NCBI-ProteinID:
XP_053355719
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All DBs
Position
7:11095427..11100725
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AA seq
275 aa
AA seq
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MSTQEVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRTLKMRGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKTAESGG
SKKAAAAAPGMAGVPGAIPGMPPMSQAPRLMPMPGQPPYMPPPGMMPPPGMGPGQMPPGQ
MMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIA
FVEFDNEVQAGAAREALQGFKITQTNAMKISFAKK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccaggaggtgcgcctgaaccacaccatttacatcaacaacctgaatgagaaa
atcaaaaaagatgaactcaagaagtcactttatgccattttctcccagtttggccagatc
ctggacatcctggtatctcggacacttaaaatgaggggtcaggcctttgtcatcttcaaa
gaggtcaatagtgcctccaacgctctgaggtccatgcagggctttccattttatgataaa
cctatgcgaattcagtatgccaagcaagactcggacattattgccaagatgaagggcaca
tatgtggagcgtgatcgcaaaaaggagaaaaagaagcctaaaactgcagaatcaggaggg
tcgaagaaggctgctgctgctgctccgggcatggctggagttcctggcgctattcctgga
atgcctcctatgagtcaagctcctcgtttgatgccaatgcctggtcagcctccttatatg
ccacctcctggtatgatgccaccccctggtatgggccctggacagatgccaccaggtcag
atgatgcctgggcaaatgcctggacagatgcctcagcaggtctcggagaacccgcctaat
cacatcctgttcctcaccaacttgccagaagagaccaatgagctcatgctgtccatgctg
tttaaccagttcccagggttcaaagaggtgcgtcttgttccaggccggcacgacatcgcc
tttgtggagtttgacaatgaagtgcaagctggtgcagccagagaagcgttacagggcttc
aagatcacgcagactaacgctatgaagatctcgtttgccaagaaataa
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