Clarias gariepinus (North African catfish): 128527428
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Entry
128527428 CDS
T10780
Symbol
nedd4a
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04120
Ubiquitin mediated proteolysis
cgar04144
Endocytosis
cgar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128527428 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128527428 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
128527428 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128527428 (nedd4a)
04121 Ubiquitin system [BR:
cgar04121
]
128527428 (nedd4a)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128527428 (nedd4a)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128527428 (nedd4a)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
128527428 (nedd4a)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
HECT type E3
128527428 (nedd4a)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
128527428 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
DUF5419
Motif
Other DBs
NCBI-GeneID:
128527428
NCBI-ProteinID:
XP_053355747
LinkDB
All DBs
Position
7:complement(4477246..4527169)
Genome browser
AA seq
1247 aa
AA seq
DB search
MARRLRLHFAARRSNTDPLSESCSHEVEDGLGTPARSPAEPLPHPNSFHMKVTPGQLALG
LPPLSPDYGSLQRHTTVFVPKVNSSAGNRKSTLQISLQSSSRQNLDGEICGGGGEETDHG
ICDGGAGGSSDGGSCSSSTASDVGYCSSNSIFESDVAERKMSHDKGAFRRRTKAPLRRCS
SLVIFPRSPCTTPPASPVSPVAAPLLPTSTRGPFQTSHQLQLSPTDASADEPKVSVASAV
NGVRLSKSTYAQPTEVRDARPILQFSVSNDLSVRSEQPERHSGVPVHPTNQPPLPPGKGN
TARTVVSIDCSKSSEKSEEANTKLGNRYPKLYHSTSACVLPTGKLSTEKRHHTYPTIGES
NASREIWFPRGLQRSISLEVPFSSTGISCHMSNTQQLSCVNGGAHVHIHVSRGNGVKEPN
LPKDTSDNVKNQQAFTNAGTRDDFLGQVDVPLHQIPTEAPGSERPYTFKDFLLHPRSHKS
RVKGHLRLKMTYLPKSNGSEEEQSEQVEEVDPGWEFLESQDACGPCQAHQLPVLPPGWEE
RQDNLGRTYYVNHENRTTQWHRPTIQDVQREAELRQSTHVQLPFITRRQISDHDESGERR
ESPESWEIITEDEGTLYSRQVSPPPPHSPLDYISFTDEFSRLQTASERRSSVPGHSSRRG
SAPLLTVEERPVHPVMLPTTPGLPPGWEEKQDSKGRMYYINHKSRTTTWTRPLVQQLIQT
ADGGASSPAGGGCGRSPSPTVYAPPQASPQASPLHSPGPQQTHTFDFSVCMPPGWEVRSA
PNGRPFFIDHNTKSTTWEDPRLRIPVHMRKQASLDPNDLGPLPPGWEERVHSDGRIFYID
HNTKTTQWEDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKKPGDIPNRFEMSVRRNALL
EDSYRRILSVKRPDLLKARLWVEFAGERGLDYGGVAREWFYLISKEMFNPYYGLFEYSAL
DNFTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPIALQD
MESVDSEYFNSLIWILENDPTDLDLRFTIDEELFGQTHQRELKPGGADIVITDSNKKEYI
HLVMQWRFVNRVQTQMSAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTK
YKNGYGPNQAVIQWFWKAVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIE
QWGTKDKLPRAHTCFNRLDLPPYESFEELREKLNIAIENTQGFDGVD
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgtctgcgcctgcattttgccgcgaggagaagcaacactgaccctctgtct
gaaagctgcagccatgaggtagaggacgggcttgggacacctgctcggagccctgcggag
cctctgcctcaccccaactcgtttcatatgaaagtgactccggggcaactggctctcggt
ctgccacctctgtcaccagattacggcagcctccaacggcatactactgtatttgtaccc
aaagtgaacagcagcgctgggaataggaaaagcacattgcagatttctttgcagtcttcc
agcaggcagaatttggatggagaaatttgtggtggcggtggagaagaaacggaccacggg
atttgcgacggcggtgctggaggcagctctgacggaggatcgtgtagcagcagcactgct
agcgatgtcggctattgtagcagcaacagcatattcgaatcggatgttgccgagcgcaag
atgtcccacgataaaggcgcattccgtcggaggaccaaggctcccttacgtcgctgctca
tcattggtcattttcccacgtagtccctgcaccacaccgccagcttcacctgtcagtccc
gtggcagctccgctgctccccacgtctacccgaggaccctttcagacctcgcaccagctg
cagctttctccgacagacgcgtctgcagacgagcccaaggtctccgtcgcatcagcggtg
aatggagttcgactgtctaagagcacctatgctcagcccactgaggttcgggatgccagg
cccattctgcagtttagcgtttcgaatgacttgtcggtaagatctgaacaacccgaaagg
cactctggtgtgccggtgcaccctacaaaccagcccccgcttccacctgggaaaggaaac
acggcgagaactgtggtcagcatcgactgctctaaatcctcagaaaagtctgaggaagct
aacacaaagcttgggaaccgttatccgaagctgtaccatagcacctcggcgtgtgtgctt
cccacagggaagttatcgaccgagaagagacaccacacgtatccgactatcggcgaatcc
aacgcgtctcgggaaatctggtttccccggggtttgcagaggagtatttcccttgaggtg
cccttctcgagcactgggatatcatgtcatatgtccaacacacaacagctcagttgcgtg
aacggaggggcacatgtgcatatacacgtgtctcgagggaatggtgtgaaagagcccaac
ttgccaaaggataccagcgacaatgttaaaaatcaacaggcttttaccaacgctgggaca
cgtgatgacttcctgggccaggtggacgttcctctgcatcagataccaacagaagcaccg
ggcagcgagaggccgtacacgtttaaagactttctgcttcatcccagaagccacaagtca
agggtcaaaggtcacctccggttaaagatgacctacttgcccaagagcaacggttcagag
gaggagcaaagtgagcaggtcgaggaagtggaccccggttgggaattcctggagagtcag
gatgcgtgcgggccgtgccaagctcaccagctgcccgtgctgccccctggctgggaggag
aggcaggacaacctcggcagaacctactacgtcaaccacgagaaccgcactacccagtgg
cacagacccactatccaggacgtgcagagagaggcggaactgagacagagcacgcacgta
cagcttcccttcatcacgcgccgacagatctccgaccacgacgagagcggcgagcgcagg
gagtcgcccgagagctgggagatcatcaccgaggacgaggggacgctgtacagccgccag
gtctcgcccccgcctcctcactcgcccctggattacatcagcttcactgacgagttcagc
aggttacagacggccagcgagaggcgcagctccgtcccgggtcacagcagtcggagaggg
agcgcgccgctgctgacggtagaggagcgtccggttcaccctgtgatgttgcccacgacc
ccaggtttgccccctggttgggaggagaagcaggacagtaagggtcgaatgtattacatc
aaccacaagagcaggaccactacctggacccgcccgctcgtccagcagctgatccagacg
gccgatggaggcgcgtcgtccccggcgggcggagggtgcggtcgatctccgagccccact
gtgtacgccccgccccaggcctcgccccaggcctcgcccctgcactcgcccggaccgcag
cagacgcacaccttcgacttctcggtctgcatgcctccaggctgggaggtgagaagcgcg
ccgaacggacggccgttcttcatcgaccacaacaccaagagcactacgtgggaagacccc
aggttaaggattccagttcacatgaggaaacaagcctcgcttgaccccaatgacctcggg
cctctgccgcctggctgggaggagagagttcacagtgacggaagaatcttctacatcgat
cacaacactaagaccacgcagtgggaggaccccagactgcagaactctgccattactgga
ccagccgtgccttactccagagactacaagcagaagtacgagtatttccgcaagaagctc
aagaaaccgggagacatcccaaaccgtttcgagatgtccgtgagacggaacgctctcctg
gaggactcgtaccgccgcatcctgtccgtcaaacgacccgacctcctcaaggcccgccta
tgggtggagtttgccggggagagggggctggactacgggggcgtggccagagagtggttc
tacctcatctccaaggagatgtttaacccttattatgggctgtttgagtactctgctctg
gacaacttcacgctgcagatcaacccgaactcaggcctctgcaacgaggatcacctgtcc
tacttcaagttcatcgggcgtgtggcgggcatggcggtctaccacggcaagctgctggac
gcgttttttattcgtcccttctacaagatgatgctgcagaagccaatcgcgttacaggac
atggagtctgtggacagcgagtactttaactctctgatatggatcctggagaacgacccc
actgacctggacctccgcttcaccatcgatgaggagctcttcggacagacgcaccagcgc
gagttgaagccaggtggcgctgacatcgtcatcacggactccaacaagaaagagtacatc
cacctcgtgatgcagtggaggttcgtgaaccgggtccagacgcagatgtccgccttcaag
gagggcttctacgagctcatcccgcaggatctgatcaagatcttcgatgagaacgagctg
gagctgttgatgtgcgggttgggagatgtggacgttaacgactggagagaaaataccaag
tataagaacggctacgggcccaaccaagccgtcatccagtggttttggaaggcggtgctg
ctgatggatgccgagaagcgaatccggttgctgcagtttgtgacggggacgtctcgcgtt
ccgatgaacggtttcgctgagctctacgggtccaacgggccgcagttattcaccatcgag
cagtgggggaccaaagacaaactgccccgggctcacacgtgctttaaccgtctggacctg
cctccgtacgagtcgttcgaggagctccgtgagaagctgaacatcgccatcgagaacact
cagggcttcgacggagtcgactag
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integrated database retrieval system
