Clarias gariepinus (North African catfish): 128527507
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Entry
128527507 CDS
T10780
Symbol
spata5l1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128527507 (spata5l1)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
128527507 (spata5l1)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
128527507 (spata5l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_16
AAA_22
TIP49
AAA_14
AAA_33
DUF815
Viral_helicase1
AAA_7
AAA_28
bpMoxR
Vps4_C
NTPase_1
AAA_lid_PRS2_C
AAA_25
AAA_19
MCM
Rad17
NACHT
AAA_30
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
128527507
NCBI-ProteinID:
XP_053355904
LinkDB
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Position
7:408703..414247
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AA seq
765 aa
AA seq
DB search
MARDLLLLPAEHSDMGTQRCRLGAALMEGLGLRLGSPVLVSLPGGASCLCTAWPRPDLAD
AYLQLDPSCSSADLRADALHGLRVGTEHLRPLICPRVKRLRVTALVQSGEFKRRTSAQAL
GSLALELLTGLYVHEKHLVNVSHAGTPLHFLRVDSVNSGSHKAGLVTSETRLEVVSLRTV
EAHRRRASEGSAVTLGGLEEVRASLKEMMTLLLRYPVSTRRVGGATGRGTLLVGAPGVGK
TQLVRAVAQDADAALVTVSGPVVVGSRPGESEENLRAAFARASEAAREEACVLFIDEIDA
LCPKRSSGTGTPENRLVAQLLTLMDGIGSDEGFIIIGATNRPDALDPALRRPGRFDREIV
IGVPTLQQRYQVLQCVCHSVPLSPCVDLRSVAEMTSGYVGADLSALSREATLQAILHSTQ
GGAGGSGQSGGEERAVRMEHFVKALRLVPPSCLRSSVGVADFKPVSWERIGGLEAVKLKL
RQSVEWPMKFPEAFVRMGVCRARGVLLFGPPGCAKTTLVKAAASSSHCSFLTLSGAELYS
PYVGDSERALAQLFRQARACAPSILFLDEIDSLVGCRDDGGGCRGSSVQAQVLSVLLNEL
DGVGFRTAERRGTGQSEKDKERTRRDHRMQLQEVCNQDVMIVAATNRPDMLDSALLRPGR
FDHIVYVPPPDLQARLAILQLHTEKMPLDPDVCLEDLATRTHLFSGADLENLCKEAALLA
LHEEGMSVSSVQQKHFQKVLQRFQPSVTPQQLLQYQQLFKHNYRS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggacctgctcctcctccccgccgagcactcggacatggggacgcagcggtgt
cgtctcggcgcggcgctgatggagggtctcgggctgcgtctcggctctcccgtgttggtg
tcactgccgggcggggcttcctgtctctgtacggcgtggccacgccccgatctggccgac
gcctacctgcagttggacccctcctgctcctcggcggacctccgcgcggacgcgctgcac
ggactccgcgtggggacggagcatctcagacctctgatctgtccgcgtgtgaagcgcctg
cgcgtgactgcgctggtgcagagcggcgagtttaaacgcaggacgtctgcgcaggcgctc
ggctcgctggctctggagctgctcacaggcctgtacgtccacgagaagcacctggtgaac
gtctcacacgcgggcacgcccctgcacttcctgcgggtggacagcgtgaactcgggctct
cataaagcgggcctcgtgacgtctgagacccgcctggaggtggtgtcgttgcggacggtg
gaagcgcaccggcgccgggcgagtgagggatccgctgtgactttggggggactggaggag
gttcgagcctcgctgaaggagatgatgacgctcctgctgcgctatccagtcagcacgcgg
cgtgtgggcggggcgacagggcggggcacgttgctggtgggagctccgggtgtggggaag
acgcagctggtgcgcgccgtggcgcaggacgcggacgcggcgctggtgacggtgagcggg
ccggtggtggtggggtcgcgacccggcgagagtgaggagaacctgcgtgccgcgttcgct
cgagcctcggaagcggcgcgagaggaagcgtgcgtgctcttcatcgacgagatcgacgcg
ctgtgtccgaaacgcagctccggcaccggaaccccggagaaccgactcgtcgctcagctc
ctcaccctcatggacggaatcggcagcgacgaggggttcatcatcatcggagccaccaac
cgaccggatgccctcgacccggcgctcaggagacccggacgcttcgacagagagatagtc
ataggtgttcccactctgcagcagcggtaccaggttctgcagtgtgtgtgtcacagtgtt
ccgctctccccgtgtgtggacctgcgctccgtcgccgagatgaccagcgggtacgtcggg
gccgatctgagcgcgctcagtagagaggcaacactgcaggccatactacactcgacacag
ggcggggccggtggttctggccaatcaggaggcgaggagcgtgcagtgaggatggagcac
tttgtgaaagcgctgcgattggttcctccctcctgcctgaggagcagtgtgggcgtggcc
gactttaaacctgtgagctgggagcgaattggaggactggaggcagtaaagctcaaactc
agacagagtgtggagtggccgatgaagttccccgaggcgtttgtgcgtatgggtgtgtgt
cgcgcgcggggtgtgttactgttcgggccgccgggctgcgccaagaccacgctggtgaaa
gcagcggcttcttcatcacactgcagcttcctcactctgagcggggcggagctctactct
ccctatgtaggggactcggagcgggcactggctcagctgttccgccaggcgcgggcctgc
gctccttccatcctgtttctggatgagattgacagcctggttggttgccgtgacgacgga
ggcggttgccgtggcagcagtgtacaggctcaggtgctgtctgtcctgctgaacgagtta
gacggagtgggctttagaaccgctgagagacgagggacgggacagagtgagaaggacaag
gagaggacacgcagagaccaccggatgcagctacaggaagtgtgtaatcaggacgtgatg
attgttgcagccactaacaggccggacatgttggacagcgcgctgctccgcccgggccga
ttcgaccacatcgtatacgtcccaccccctgacctacaggctcgtctggccatcctgcag
ctccacaccgagaaaatgccgctggacccggatgtgtgtttggaggatctggcaactcgt
acacacctgttctccggagcagatctggaaaacctctgcaaggaggccgctctgttagct
cttcatgaagaaggtatgagtgtgtcgtcggtgcagcagaaacactttcaaaaggtccta
cagaggtttcagccgtccgtcaccccacagcagctcctgcagtaccagcagctcttcaaa
cacaactaccgcagttag
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