Clarias gariepinus (North African catfish): 128527510
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Entry
128527510 CDS
T10780
Name
(RefSeq) long-chain fatty acid transport protein 2-like
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03320
PPAR signaling pathway
cgar04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128527510
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128527510
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128527510
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128527510
Enzymes [BR:
cgar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128527510
Lipid biosynthesis proteins [BR:
cgar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128527510
Transporters [BR:
cgar02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
128527510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
128527510
NCBI-ProteinID:
XP_053355908
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All DBs
Position
7:803527..824546
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AA seq
623 aa
AA seq
DB search
MSAWYALLALVAALLALLALVLRVCFPYLVSDVLYVVKGVRVALRLRRFRGSTPCYSILD
RFLDSVGSHPQKVFVLFEGRSFTYREADRLSSKAARALLQHTELREGDTVALLLGNQPDL
IWTWIGLFKLGCSVALLNTNIRARSLLHCFTCCGAKTLITGADLKDAVEEILPALREQEV
GVFLLGESCEQDGLVNLSEKMNAASDEELPRSLRSRVTMKSPAFYIYTSGTTGLPKAAVI
SHERVWLASFLQSMSGVHSDDIIYVYLPLYHSAGLLMGLTGAIERGVTVVLKRKFSVSQF
WIDCRKHNVTVIQYIGEIMRYLCNTPKADSDRMHNVRLALGNGIRPDTWVEFLQRFGDIR
VCECYGATEGNIGFVNYTGKVGAIGRMNVILKKLSRFALIKYDPELGEPVRDSRGFCVEV
SAGETGLLVAKITKVAPFSGYANNKQQTDKKKLRDVFEQGDIYFNSGDLMKVDKEGFVFF
QDRIGDTFRWKGENVATTEVADILIMVDFIEEANVYGVKVPGHEGRIGMAAIKLMEGRAF
DISAAYKHIESYLPMYARPRFIRIQEVLDTTGTYKQMKVKLTEEGFDPKTIKDKMYFLDD
RKKAYVPMTEDIFNSISNGHLRL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgtggtacgcgctcctggcgctcgtggcggcgctcctggcgctcctggcgctc
gtgctgcgcgtgtgtttcccgtacctggtgtccgacgtgctgtacgtggtgaagggagtg
cgcgtggctctgaggctcaggcggttccgcggctccactccgtgttactccatcctggac
cggttcctggactcggtggggtctcaccctcagaaggtcttcgtgctgtttgagggtcgg
tccttcacctaccgcgaggcggacaggttgagcagtaaagcggcgcgcgctctgctccag
cacaccgagctgcgcgagggcgacaccgtggcgctgctcctcgggaaccaaccggacctc
atctggacctggatcggactctttaaactgggctgcagcgtcgcgctgctcaacaccaac
atccgggccaggagcctcctgcactgcttcacctgctgcggggcaaagaccctcatcacc
ggggcggatctaaaggacgccgtggaggaaatacttccagcactgagagagcaggaggtt
ggtgtgttcctcctgggagagagctgcgagcaggatggactcgtgaaccttagcgagaaa
atgaatgctgcgagcgatgaggaactcccacgatcactccgatccagagtcaccatgaag
agccctgcattctacatctacacttcaggcaccactggtctcccgaaagcagctgtgatc
agtcatgagagggtttggttggcctccttcttacagagcatgtccggcgtccattctgat
gacatcatctacgtgtacctgcccctctaccacagcgctggcctcctcatgggcctgacg
ggggcaatagagcgcggagtcacggtggtgttgaagagaaagttctcagtgtctcagttc
tggattgactgcaggaaacacaatgtgacggttatccagtatatcggcgagatcatgcgc
tacctctgtaacacacccaaggcagactcggatcgcatgcacaacgtgcgtcttgctctg
gggaacggtatccgtcccgacacgtgggtagagttcctgcagcggtttggagatatacgt
gtctgcgagtgctacggagcgacggaaggaaacatcggttttgtgaactacaccgggaaa
gtaggcgccatcggtcggatgaatgtgatcctaaagaaactttcacgctttgctttgatc
aaatacgaccctgagctgggagaaccggtgcgagactcccgaggattctgcgtggaggtt
tctgctggagagacgggcctgctggtggctaagatcactaaagtggctccatttagcggc
tatgctaacaacaagcagcaaacagataaaaagaagctgagggatgtctttgagcaggga
gacatctactttaactccggagacctgatgaaagttgacaaagagggctttgttttcttc
caggaccgtattggggacacgttcaggtggaagggcgagaatgtggctaccactgaagtg
gctgatattttgatcatggtggatttcatagaggaggcgaatgtctatggagtcaaagtg
ccaggtcatgagggcagaatcggaatggctgctatcaagctgatggagggacgggccttc
gacatctctgcagcgtacaagcacattgagagttacttgcccatgtacgctcggccacgc
ttcattaggatacaggaggtgctagacaccacaggcacctacaaacagatgaaggtgaaa
ctgaccgaggagggattcgatccaaagaccatcaaggataagatgtacttcctggatgac
aggaaaaaagcctatgtgcccatgacggaggacatttttaactccattagcaatggacac
ctaagattataa
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