Clarias gariepinus (North African catfish): 128527520
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Entry
128527520 CDS
T10780
Name
(RefSeq) long-chain fatty acid transport protein 2-like
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03320
PPAR signaling pathway
cgar04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128527520
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128527520
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128527520
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128527520
Enzymes [BR:
cgar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128527520
Lipid biosynthesis proteins [BR:
cgar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128527520
Transporters [BR:
cgar02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
128527520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
128527520
NCBI-ProteinID:
XP_053355922
LinkDB
All DBs
Position
7:complement(775911..783071)
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AA seq
619 aa
AA seq
DB search
MELLYAAFATLSVMFMLFFVNFPYFLHDCAFLIKVLRIKSKRQRLRKRVPLYTVLECFLE
DVSRHPHKPFIIFEDDVYTYLPVDCWSNKVAHTLLKHTHLREGDTAALLVGNEPNFIFLW
LGLMKIGCSVSLFNTNIRSKSLMRCFMCCKTKVLIAGAEFSDAVCEVLPELRERGVSVFL
LCDNCDMDGIQSLKDKMDDSDDGPVSLMLRANITMKTPAVYIYTSGTTGLPKAGIVSHDR
MFGGTFYQSLLGVKHDDVIYIALPLYHAAGFIVGLNGVIERGITVVLRRKFSVSQFWNDC
RKHNVTVIMYIGEILRYLCNTPKRETDRQHMVRRAIGNGLRADVWQEFQSRFGVKHIREF
YAASDGNMGFMNYPEKVGAVGKQNFLYKKMFPHALIRYDTETQGPVRDSRGRCVPVPTGE
TGLLVCKITERTPFQGYAGNPEQTEKKKLRNVFEDGDVYLNTGDLLRTDHQGFIYFQDRV
GDTFRWKGENVATTEVSDVISLLDFVEEVCVYGFQIKGHEGRVGMAALRVKEKREFDCNK
AFDHVTNFLPVYARPRFIRILRSLDLTGTFKQVKTSLMKEGFDPEKVTPPIYFLQESSKS
YIPLTHTHYKSIISGEVRF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggagctactgtacgctgcatttgctactctgagcgtgatgtttatgctgttttttgta
aactttccttatttcctgcatgactgtgcgtttctaattaaagttctcaggattaaatca
aagcggcaaaggttacggaagagagttccgttatacactgtgctcgagtgctttctggaa
gatgtgtccagacatccacataaacccttcataatttttgaggatgatgtctacacgtac
ctgccggtggactgctggagcaacaaggtagcacacacgctgcttaaacacacgcacctg
agagagggagatacggccgcgctgcttgtgggcaatgaaccaaacttcatcttcctctgg
ctcggactgatgaagatcggatgttctgtgtcgcttttcaacaccaacattcggagcaaa
tctctaatgcgctgcttcatgtgttgtaagacaaaagtgctgattgcaggggcagagttt
agcgatgcagtgtgtgaggtgctaccagagttgcgtgaacgtggcgtgtctgttttcctg
ttgtgtgataattgtgacatggatggaattcagtctctaaaagataagatggatgacagt
gacgatgggcccgtgagtctcatgctgagagctaacattactatgaaaacccctgccgtg
tacatctacacatctggaactacaggtctgcctaaagcaggtattgtcagtcatgaccga
atgtttggtggcactttctaccagtcattgttaggcgtcaagcacgatgatgtcatctac
atagccctccccctttaccatgctgcaggatttatcgttggtctaaatggggtgatagag
aggggaatcacagtagtgttgaggagaaagttctcagtgtctcagttctggaacgactgc
aggaagcacaatgtcacggtgatcatgtatattggagagatcctgcgctacctctgtaac
acacccaagagagagacagaccggcagcacatggtgcgaagagccattggaaacggactg
cgtgctgacgtctggcaagaatttcagagcaggtttggggtaaaacacattagagagttc
tacgctgcatctgacgggaatatgggtttcatgaactacccagagaaagtgggagctgtg
ggcaaacagaacttcctgtacaagaaaatgtttccccatgcactgattcggtacgacact
gagacacagggaccagtccgggacagcagggggcgctgtgtccccgttcctacaggtgaa
acaggactccttgtgtgtaagatcactgagcgcactccatttcaaggatacgcaggaaat
ccagaacaaacggagaagaagaagctgcgtaacgtgtttgaggacggagatgtttatctg
aacactggagatctgttgaggaccgaccaccagggcttcatctacttccaagaccgggtc
ggagacacttttagatggaaaggagagaatgtggccaccactgaggtgtctgatgttata
tcactgctggattttgttgaagaagtgtgtgtgtacggttttcaaattaaaggtcatgag
ggtcgcgtcggcatggcagcactgagagtaaaggaaaagcgagagtttgactgcaacaaa
gctttcgatcacgtcaccaacttcctgcctgtgtacgctcggccccgcttcatacgcatc
ctgaggagtctggacctgaccgggacgtttaaacaggtgaaaacttctctgatgaaggaa
ggatttgatcctgagaaagtgactccgcccatttatttcctgcaggagagcagcaagagc
tacatccccctgacacacacacactacaaatctatcatatcaggggaggtccgcttctga
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