Clarias gariepinus (North African catfish): 128527588
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Entry
128527588 CDS
T10780
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128527588 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128527588 (dhx36)
03012 Translation factors [BR:
cgar03012
]
128527588 (dhx36)
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128527588 (dhx36)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128527588 (dhx36)
Translation factors [BR:
cgar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128527588 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
128527588
NCBI-ProteinID:
XP_053356021
LinkDB
All DBs
Position
7:7594410..7635427
Genome browser
AA seq
1019 aa
AA seq
DB search
MSYGYGRGRGRRGGGGGGGGGGERWSSDWEARDEQPRGGGGRGKHPPHLKGREIGLWYAK
WGGVKRSEAERKSRAVVQMDESREQHITQLLNSVQGEPSRDWEPSRDYKPSVPPYRQVKP
EPSGHSYFDGDEPPEEPREEPRKTVKVAKIEAVKVKEEEPEIKTDVKEQCTERDLEYLMQ
EIERKPSLDEELKSDLKSKRQNPRYLDMLRFREKLPSYGMREELVELIQTNRVVVVSGET
GCGKTTQVPQFILDDYIERGAGSLCRVACTQPRRISAISVAERVAAERAESVGEGKSCGY
QIRLQSRLPRKQGSVLYCTTGIILQWLRSDPCLSSISHLVLDEIHERSLHSDVLLNIVKD
LLTHRDDLKIVLMSATMNADKFSKYFDNCPMIHIPGHTFPVKEYLLEDVVEMLRFRPQQQ
QDRRPRFRRGFMSGQNMRPEKQEKEEEYKDSWPCYARTLRDRFSDSTVDALEMMDEDDKI
NLELIVALIRHIVLNEDDGAILVFLPGWDNISSLNDLLIADQMFKSDKFVIIPLHSLMPT
VNQTQVFKRPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMTAEW
VSLANAKQRKGRAGRVSPGKCYHLYNGLRASLLESYQLPEIQRTPLEELCLQIKILKLGA
IASFLKKTLDPPSDRAIELAITHLMDLNALDRNEELTPLGFHLARLPVEPHIGKMILFGA
LLTCLDPVLTIAASLSFKDPFSIPLGKEKLADHRRKILSKNTKSDHLTVVNAFRGWEEAK
RRGYRYEREYCWDNFLSANTLQMLQNMKGQFAEHLLAAGFVSSKDPKHPGANINSENEKL
LKAVIVAGLYPKVAKIRPSPHKKRPIPAKVYTKADGKVCIHPKSVNSEETQFHYTWLIYH
LKMRTTSIFLYDCTEVSPFSLLFFGGDISIQKDQEQETIAVDEWIVFQSPARIAHLVKNL
KKELDLLLEEKIKRPRPVDWSDRASKDCAVISAIVDLITTQESAASQQEPYRRSHQHWD
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggctacgggagagggagaggccggagaggaggaggaggaggaggtggtgga
ggtggagagcggtggagctccgactgggaagcccgggatgagcagcctcgaggcggcgga
ggccgtgggaaacacccgccgcacctgaaagggagagagatcggactgtggtacgcgaaa
tggggaggagtgaaacgatccgaggccgagaggaagtcgagagctgtggttcagatggac
gagtcgagagagcagcacatcacgcagctcttaaattcagtccagggggaaccgtcccgt
gactgggaaccgtcccgtgactacaagccgtccgtcccaccgtaccgtcaggtgaagccg
gaaccaagcggacacagctacttcgatggcgacgagcctccagaagagcctcgagaagag
ccgcggaaaacagtaaaagtggctaaaatagaggcggtgaaggtaaaggaagaggagccg
gagataaagacggacgtgaaggaacagtgcacggagcgagatctggaatacctgatgcag
gagatcgagcgtaagccttcgctggatgaagagctgaaaagcgacctcaagagcaaaaga
cagaatccaagatacctggacatgctgagatttcgagagaagctgccttcttacggcatg
agagaggagctggtggagctgatccagaccaaccgcgtggtggtagtgagcggagagacc
ggctgtggaaagaccacgcaggtgccgcagttcatcctggacgactacatcgagcgtggc
gcgggctcgctctgcagggtggcgtgcacacagccgcgccgcatcagcgccatatccgtg
gccgagagggtggcggcggagagggcggagtctgtcggagaggggaagtcctgcggatat
cagatccgtctgcagagccggttgccacggaaacaaggctcggtgctgtattgtacgacg
ggaattattcttcagtggctgcgctcggacccgtgtttgtcgagtatcagtcacctggtt
ctagacgagatccacgagcgcagcctgcactcagacgtcctcctgaacatcgtgaaggac
ctcctgacccacagagacgacctcaagatagtgctcatgagcgccaccatgaacgccgac
aagttcagcaagtacttcgataactgccccatgatccacatcccgggacacaccttcccc
gtgaaagagtacctgctggaggatgtagtcgagatgctcaggttccggccgcagcagcag
caggatcgacgtcctcgcttcaggagaggcttcatgagcggacaaaacatgcggcctgag
aaacaggagaaagaagaggagtacaaggacagctggccttgttatgctcgcacactccga
gacaggttctccgacagcaccgtcgacgccctggagatgatggacgaggacgacaagatc
aacctggagctgatcgtagcgctcattcgccacatcgtgctgaacgaagacgacggagcc
atcctggttttcctgcctggctgggacaacatcagcagcctgaatgacctcctgatagcg
gaccagatgtttaaatctgataagtttgtgattattccactacactccctgatgcccacg
gtcaaccagacgcaggtttttaaaaggccacctcctggagtgcggaagatcgtgattgca
acaaacatagcagaaaccagtatcacgatagacgacgtggtgtacgtgatcgatgggggg
aagattaaggaaactcacttcgacacgcagaacaacatcagtacgatgacggcggagtgg
gtgagcctcgccaacgccaagcagagaaagggcagagccggcagggtgtctccgggtaaa
tgctaccacctgtacaacggcctgagggcgagtctgctggaaagctaccagctccctgag
atccagcgcaccccactcgaggagctctgtctgcagatcaaaatcctgaaattgggcgct
atcgcttcattcctgaagaagactctggatcctccgtcagacagagctatcgagctggct
atcactcatctaatggatctgaacgccctggaccggaacgaggagttgaccccgttggga
tttcacctggcccgtttgcccgtggagccgcacatcgggaagatgatcctgttcggagcg
ctgctcacctgcctggacccggtgctaaccatagcggctagccttagctttaaagacccg
ttctccataccactggggaaggaaaaactagccgaccacagaagaaaaatcttgtccaaa
aacaccaagagcgaccacctaaccgtagtcaacgccttccggggctgggaggaggcaaag
cgccgtggctacaggtacgagcgggaatactgctgggacaacttcctgtcggccaacacg
ctccagatgttacagaatatgaaaggacagtttgcggagcatctcttggcagctggattt
gtgagcagtaaagacccgaagcatcccggagccaacatcaactctgaaaacgagaagctc
ctgaaggcagtgatcgtggccggcttgtaccccaaagtggccaagatccgccccagcccc
cacaagaagagacccataccagcgaaagtgtacaccaaggctgatgggaaggtctgtatt
caccctaaatctgtcaactccgaggagacgcagttccactacacctggctcatttatcac
ttgaagatgagaaccaccagtatttttctgtacgactgtaccgaggtgtctccgttctcg
ctcctcttcttcggtggtgacatctccatccagaaggaccaggagcaggagaccatcgcg
gtggacgaatggatcgtcttccagtctcccgctcgcatcgctcacctggtcaagaacctg
aagaaggaactcgatctgctgctggaggagaaaatcaagcggccgcgcccggtggactgg
agcgaccgcgcctccaaagactgcgccgtcatctcggccatcgtcgacctcatcaccacg
caggagagcgccgcgtcccagcaagagccgtacaggagaagccaccagcactgggactaa
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integrated database retrieval system
