Clarias gariepinus (North African catfish): 128527589
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Entry
128527589 CDS
T10780
Name
(RefSeq) rho guanine nucleotide exchange factor 26-like
KO
K13744
Rho guanine nucleotide exchange factor 26
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar05100
Bacterial invasion of epithelial cells
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128527589
05100 Bacterial invasion of epithelial cells
128527589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128527589
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Macropinocytosis
Others
128527589
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128527589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
SOS1_NGEF_PH
RHG20_PH
PH
DUF4813
ECT2_PH
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
128527589
NCBI-ProteinID:
XP_053356022
LinkDB
All DBs
Position
7:complement(7635474..7684075)
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AA seq
904 aa
AA seq
DB search
MDFSNEVDLSNNNNNCSNGNFNAPLWKKRATDQVSNANLKPKPRPLSYQIDGVLMTDFPL
EDKCSFTLTQPAETITTTQGTMVIKHVLNKPARKTRVVRSISIGHLSSGRFSLARFRSEN
NNNEDSVASNQVSKSTQSTKTANGSIKTKTKRDHDPLKRLSSPVTLVSQSEQIVFGDSSP
ASVIQTPQKPTSPLLNSPQLSSPVALRASSQSSMSSTRSLSSCSSSSSSIPSTPTEQSLS
PSEDSGVPPVSRQSSITSQGSDAKSPLPRMVLSTHSPAALKLGTQQLIPHNLASDKRPGK
TGQSGGLMDPSKRNLRVRSMVESGSFFSSTKEDEEADSEDAPGLFRRGLRSTSYRRAVVS
GVELEVPSNLPRVTEMKEGPRSPRPSKSKSGQKKKRLQSQRTFDSEEDEVLYQNYQEKAL
HNDSDEDAESRESKADERIVVQYKPIRTSWSQLSVVKKSGVCDQLSQEERKRQEAIFEVI
SSEHSYLHSLMILIRLFKDSAELRDTMTKTDHHHLFSNIVDVCEASKKFFKELEDRHQQN
IVIDDVSDIVLRHAQANFEPYVTYCSNEVYQQRTFQKLVNKRSTFKEVLSRIEAHPDCRN
LPMISFLILPMQRVTRLPLLMDTICQKTPKDSPQCEACKKALQSVSKLVRKCNEGARTME
RTEMMYTINSQLEFKIKPFPLVSSSRWMVKRGELTAYVEESGIFSRKTTRHQVYFFLFND
VLIVTRKKSDESYTVIDYALRHQIWVGPCQLEDLNLSPTRTTAGMLTSRQAGANHLFRLK
FRSNHSGDKVPMVLGAELLNERARWISALGHTNSEKRNVDRTNSMQVEVIRTYTARQPDE
LSLQVADVVIVSQTADDGWYEGERLRDGERGWFLAECAQPITCQATIEKNMQRMNRLQGL
ETNV
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggattttagcaacgaggttgatctttccaacaacaacaacaactgcagcaacggcaac
ttcaacgctcctctgtggaaaaagcgtgccacggaccaggtctcgaacgccaacctgaaa
cccaaaccgagacctttgagttatcagattgacggtgtcctcatgaccgatttccccttg
gaggacaagtgctctttcactctcacgcagcctgcagagacgatcactacgacacaagga
accatggtgattaaacatgttttgaacaagcctgcccgtaagactcgcgttgtaaggagc
attagtattgggcatctatccagtggacgcttttccctggctagattcagatcagagaat
aataataatgaagactctgtggccagtaaccaggtctcaaaaagcactcagtctacaaaa
actgcaaatggctcgatcaaaactaagaccaaaagagatcatgatcctctaaagcgacta
tccagcccagttaccctcgtctcccagagcgagcagattgttttcggagactcgtcccca
gcatcagttattcaaaccccacagaaacctacctcccccttattgaattccccacagctc
tcctctccagttgctcttcgagcttcatctcagagttccatgtccagcactcgttccctt
tcttcttgctcttcttcctcctcctccattcccagcacaccaaccgaacaatccctgtct
ccatctgaagacagcggcgtacctccagtttcacgtcagtcctcgatcacctcccagggt
tcggacgccaagtcgcccctgcctcgcatggtcctcagtacccacagccctgctgcgtta
aagctgggcacccagcagctcattcctcacaacctggcatctgacaaacgacccggcaaa
accggacagtctggcgggctgatggacccttccaaacgtaacctccgtgtccgcagcatg
gtggagagcggatcctttttctccagcactaaggaagatgaagaggcagatagtgaggat
gctcctgggctgttcaggaggggcctgaggtccacgtcatatcgccgggctgtggtcagc
ggtgtagaactggaagtcccttctaacctgccaagagtcacagagatgaaagaaggaccc
cggagtccacggccatccaaaagcaagagtggacagaagaagaaaagactgcagtcccaa
aggacatttgacagcgaggaagacgaggttctgtatcagaactaccaggagaaggctctg
cacaacgactcggatgaggacgccgagtcgagagagtccaaagcggacgagcgcatcgtg
gtgcagtacaaacccatccggacgtcctggagtcagcttagcgtggtgaaaaaaagcggc
gtgtgtgatcagctgagccaagaggagcgcaagagacaagaggccatcttcgaggtgatc
tcgtccgagcacagctacctccacagcctcatgatcctcatccggctgttcaaggactcg
gcagagctccgagacaccatgaccaagacggaccaccaccacctcttctccaacatcgtg
gacgtgtgtgaggccagtaaaaagttctttaaggaactcgaggacagacaccagcagaat
atcgtcatcgatgacgtcagcgacatcgtcctcagacacgcccaggcaaacttcgaaccc
tatgtgacgtactgctcgaacgaggtgtatcagcaaagaaccttccaaaaactggtaaac
aagaggtcgaccttcaaggaggtcctgtcccggatcgaggctcacccggattgccggaac
ctacccatgatctctttcctgatcctccccatgcagagagtcaccaggctccctttgctc
atggacactatttgtcagaaaacacctaaagactctcctcagtgtgaagcgtgcaagaaa
gctcttcagtccgtcagtaagcttgtacggaagtgcaatgaaggtgcgaggacaatggaa
aggaccgagatgatgtacaccattaactcccagctggagtttaagattaagccgttcccg
ctggtgtcgtcctctcgctggatggtgaagcgcggtgagctcacggcctacgtggaggag
agcgggatcttctccaggaagacgacacgccaccaggtctacttcttcctcttcaacgac
gtcctcatcgtcacccgcaagaagagtgacgagagctacacggtgatagactacgctctg
aggcatcagatctgggtggggccgtgccagctggaggacctgaacctctcgccaacacgc
accaccgcgggcatgctgacgtcacgacaggccggagccaatcacctgttccgactcaaa
ttccgcagcaaccactcaggagacaaagtgcccatggtcctgggggcggagcttcttaat
gagcgcgctcgctggatcagcgcactcggacacactaacagtgagaagaggaacgtggac
agaacaaattccatgcaggtggaggtgattcgtacgtacacggctcggcagcctgatgaa
ctctcgctgcaggtggcagacgtcgtgatcgtctcacagacagcagacgacggttggtac
gagggcgagcgattacgggacggagagagaggctggttcctcgccgagtgtgctcagcca
atcacgtgccaggccaccatcgagaagaacatgcagaggatgaaccgcctccagggtctg
gagaccaacgtgtga
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