Clarias gariepinus (North African catfish): 128527631
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Entry
128527631 CDS
T10780
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128527631 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128527631
NCBI-ProteinID:
XP_053356069
LinkDB
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Position
7:complement(18975502..19007456)
Genome browser
AA seq
1725 aa
AA seq
DB search
MEDKSPRVADYFVVAGLTDSSEPFEEDIACDESCQRSSGQAEAPITDVAVVFRSQGEEVP
QGYTCIECTPSGLPAELNGGSIMGPQIFLCYRRGRDKPPLTDLGVLYEWREKLKPGCHII
QTTPFGRPANISSSSSQRIYITYRRAPECHSHATLAVTDICLVVPGKGETPPYAFCKVDK
NLNSSMWGSSMYLCYKKSLAKTNTIAFKAGLLSRYPEEDYESFPLPESVPLFCLPMGASI
ECWPSRTKYSLPVFSTFVLTGSSGEKVYGAAIQFYEVYPEERLTDRQRTQLGLQASGPSA
EDSMMVHTNKSICLLSRWPFFDAFRTFLTFLYRYSISGPHTLPIEKHISHFMHKVPFPSS
QRPRILVQLSPHDSLMLSQPVSSPLSLSGGSLSTLLLNLGPKNAVSLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYEPP
ADISCVDLDTNTISHKEDRRALTWKILPRKACKRLINTLSNLHQQLVQDYMMSREEGQID
VTMSERDPGSGGKSLQSLELEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSLFD
LQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKLFGTEKGGK
VDSERLEDSRLIELDKSQRSEHTVFITPPELPPVPEGEEPSILYSYSGFPVLNAELCEPQ
EGPGIPMVTTNSRHTSPGSPAAIFRRSKQEIKSAQRMAKTYSSIPHMWSKCLLRHCHGLW
FICLPAYVAACHSKVRALRAAYDVLRMMQDKKLQPPDEVCYRILMQLCGQYGQPVLAVRV
LFEMKKAGVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVVQFKQVWRRQA
SHAKDPHLSDASDLDSVSHGSLDSTNDSAERASIDTDFTKMDSSDDGSSTGGQSDQGYDS
AGRMGGGEEQDGSPHMKERDIIPLSKTGTSIKKDSSAALRTLHPSDVRDAAAVPKRPNSL
DIFGKNPVRPCTLQLTSDQPLTNSKDCKPKQDYLDEEEVDEAKGTTYPLKAAAERSTSCT
VALETSISNARCSVARSVSFSSTQGRMPPRTGIESGFDPLSLMAAESQDGKSGEPGEMDD
APGTRRHLAKEIQLHMENLSSPVSQRSLSTDLRSIQSPSPQSSPRQTAMPGSPSTPLQPQ
PRSRLFSSPSLPLGCPRKGKEARPTSLVSPSSPTPSASSFSMESLLTPTLDIFRSSFMSA
GKGVAEKASRLYSRLSSQTSIAQDLNSDRVSVSSLGSGEPDCSSLFEGELCPDPEGLSSP
QRDSSLSVTPFKRSPNRNSRCLESPSAPPRLFRQASLLGSSLAVVKAPQIPDVCPDANLT
PSQQNYDIELRMSSCSRCNTCECLAYDEEIMAGWTADDSNLNSTCPFCGSAFLPLLNVDI
QDLTRQDRIPFQDLPSSYTETKDASCMDEEPSSKSSDNASNTASSSTAPITVPYLSPLVL
WKELESLLENEGEHVISSPAIVDHHPIVFWNLVWFFRRLELPSSLPALILSSKHCSQSMQ
TDPQPLQSNSSEDSKNVLVQILWDNPKLHQDPIPPCYVLWKTYCSNSNACVPTMLEEEQP
VTLELVQSVVRSIQKNDVFQPMSQILQLLGTRLGFIRQRSLYRDILFLTLVALGKNNINI
DAFDREYKLAYDRLTPSQVKLTHNCDRPPGAGVMECRRTFGLPSL
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaaagcccacgtgtagcggactactttgtagtggcaggtctcactgattcc
tctgagcctttcgaagaggatatagcatgcgatgaaagctgccagagaagctcaggccaa
gccgaggcaccaatcacagatgtagcggtggtgtttcgctctcagggcgaggaggtgcca
cagggttacacctgcatcgagtgcactccctcgggccttcctgctgaactgaatggaggc
agcatcatgggcccacagattttcctgtgctacaggcgaggacgagacaagccgcctctc
actgaccttggcgtcctctatgagtggagggagaagttgaagccgggatgtcacatcatc
caaaccacacctttcggtcgccctgccaacatcagcagctcttcctcacagagaatctac
atcacataccgccgtgcgcctgaatgccattctcatgccacgttggccgtcacagacatt
tgtcttgttgttcctggcaaaggagaaacaccaccttacgccttctgcaaagtggacaaa
aacctaaacagcagcatgtggggctcctctatgtacctgtgctacaaaaagtctttggcc
aaaacaaacactattgcattcaaagcaggcctgctgtcacggtacccagaagaggactat
gagtcgttccctttgcccgagtcagtgcccctcttctgtctgccaatgggagcatccata
gagtgctggccctcccggacgaaatactctctccctgtattctcaacattcgttctcact
ggatcttctggagagaaggtttatggtgcagcgatccagttttacgaggtatacccagaa
gagcgtttgactgacagacaacgcacacaactgggcttacaagccagtggtccaagtgct
gaggactcaatgatggtccacaccaacaaaagcatctgccttctttctcgctggcccttt
tttgacgctttccgcacattcctcaccttcctctaccgctactcaatttctgggccacac
acattgcctattgagaagcatatctctcattttatgcacaaagttcctttcccatcttct
caaagaccacgaattctggtccagttatctccacatgatagtctcatgctgagccagcct
gtctcctcccctctgtctctgagtggtggaagtctctccacattgctgctaaacctgggt
cctaaaaatgcagtgagtctgctggttctagctgtaactgaacacaagattttggtgcat
tcgttgcggccagctgttctaaccagtgttactgaggccctggtgtcgatgatctttccc
ttccactggccatgcccatacattcccctgtgcccgctggcacttgccgatgtactcagt
gctccatgccccttcatagttggtgtggactcacgctattttgacttgtatgagccaccg
gctgacattagctgtgtggacctggacaccaacaccatctcgcacaaagaagatcgccga
gccctgacatggaagatcctgccaaggaaagcttgcaaacgtctaatcaacaccctcagc
aatctccatcagcagctcgtgcaggattatatgatgagtcgtgaggaaggccagatagac
gtgaccatgagcgagcgtgaccctggcagcggggggaagagtctccagtcactggagcta
gagatccaagaagccttcctgcgtttcatggcagccattcttaagggttaccgctcctac
ttgctgcctattactcaggctccttcggaaaaagcgactgacgccagctctctctttgac
ctgcaagggttcctgaagagtcgtgatcgctcccatcaaaagttttactctctcatgacc
aagactcagatgttcatccgctttattgaggagtgctcctttgtcagcgataaggatgca
agcttggcgttttttgatgactgtgtagacaagctctttggcacagaaaagggaggaaag
gtggacagtgagagactggaagacagcaggcttattgagctggacaaatcacaacggagt
gagcacacagtattcatcacacctccagagcttccacctgtgcctgagggagaggagccc
tccatactttatagctacagtggctttcccgtgctgaacgctgaactctgtgaaccccag
gagggccctggcatccctatggtaaccacaaactccagacacaccagccctggaagccca
gccgccattttccgtcgatccaaacaagagattaaatcagcccagcgcatggccaagacc
tattcatccatacctcacatgtggtccaagtgtctgctgcgccactgtcatggcctgtgg
ttcatctgcctgccagcctatgtagcagcatgccactctaaggtgcgggcactccgagct
gcttacgatgtccttaggatgatgcaggacaagaagctgcagccacctgatgaggtgtgt
taccggatcctgatgcagctctgcgggcagtacgggcagccggtcctggctgttcgggtg
ctgttcgagatgaagaaggccggagttcagcccaatgccataacgtacggatactataac
agagcagtgttggagagcacatggccttcctccactagagggggctatttcctgtggggt
aaactgcgcaatgttgttcggggagtggtgcagttcaaacaagtgtggaggagacaggct
agtcatgccaaagatccacatctctcagacgccagtgatctggacagcgtaagccacggc
agtctggacagcactaatgactcagcagagcgtgcctctatcgatactgacttcaccaaa
atggattccagtgacgatggatccagcacaggtggacaatcagatcaaggttatgactct
gcgggacggatggggggaggagaagagcaggacggctctcctcacatgaaggagagagac
atcattcctctgtccaagacaggaacatctatcaaaaaggactcatctgctgcactgaga
acccttcatccctcagatgtaagagatgctgcagctgtacctaaacgtcccaactcattg
gacatctttggaaaaaatcctgtgaggccctgtacgttacagctgacttctgatcagcct
ctgaccaactcgaaagattgtaaacctaagcaagattatctggatgaagaggaggtagac
gaagcaaaaggcacaacatacccactcaaagctgctgcagagaggagcacaagttgcaca
gttgccctggagacaagcataagcaatgcacgctgcagtgtggcacgtagtgtgagcttt
agcagcactcaaggccgtatgccaccacgaacagggatcgagtctggctttgatccgttg
tcccttatggcagctgagagccaggacggcaagtcgggtgagccaggagagatggacgat
gcccctggaacacggcgtcacctggctaaggagatccagctacacatggagaaccttagc
agccctgtgagtcagcgttctctcagcacagatctacgcagcattcagagcccctcaccg
cagagctcaccccggcagactgctatgccaggttcaccaagcaccccgttgcagccccag
ccccggagcagattattctcttcaccctcactaccactgggatgcccacggaaaggcaag
gaagcacggcccacctcattagtatcaccctcctctcccaccccttctgcctcctctttc
tccatggaatctctgctcacacccacactagacatctttaggagcagcttcatgtcagca
ggcaagggcgtggctgagaaagccagtcgtctctattcgaggctctcctctcaaacttct
attgcacaagacctgaactctgatcgggtcagcgtgtcttcactgggctcaggagagcct
gactgctcctctctgttcgagggtgaactttgtcctgacccagaaggtctttcctccccc
cagagagactcctctctcagcgtcactccctttaagaggagtccaaacaggaacagtcgc
tgcttagagagtccttcggcccctccaaggcttttccgccaggcctctctccttggatca
tcactggcagtggtgaaagccccacaaatcccagatgtatgtcctgatgccaacctcaca
ccatcccagcagaattatgacatagagttgcgcatgtccagttgctcacgctgcaacact
tgcgagtgtctggcatatgatgaggagatcatggctggctggacagctgatgattccaat
ttgaatagcacttgccctttctgtggctcagccttcttgcccttgcttaatgtcgacatc
caagacctgacgaggcaggacagaattccttttcaagaccttcctagttcttatacggaa
acaaaagatgcttcatgtatggatgaagagccaagcagtaaatcatcagataatgcctcc
aacactgctagcagtagcacagcaccaatcaccgttccctacttgagtcctctggtgctg
tggaaggagctggagagcctcttggagaacgaaggcgaacatgttatctcctcaccagcc
attgtggaccaccaccccattgtcttctggaatctggtttggtttttccgcaggctggag
ctgcccagcagcctgccagccctcatccttagctccaagcactgcagccagagcatgcag
actgatccacagcctctccagagcaactcctcagaggacagtaagaatgtgttagtccag
attttgtgggacaatcccaaactgcaccaggaccccatccctccctgctatgtgctgtgg
aagacatactgttcaaactctaatgcttgcgtccccactatgctggaggaggaacagcct
gtgaccctggagcttgtccaaagtgttgtcaggagcattcagaagaacgatgtcttccag
ccaatgagccaaatacttcagctgcttggtaccaggctgggattcatcaggcagcggagc
ctgtatagagatatcttattcttgacattggtagcactgggcaagaacaatatcaacatt
gacgcttttgaccgtgagtataagttggcgtatgatcgactgacccccagccaggtcaaa
ctgacacacaactgtgaccggccacctggcgctggagtcatggagtgtaggaggactttt
gggctgccgagtctgtga
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integrated database retrieval system
