Clarias gariepinus (North African catfish): 128527661
Help
Entry
128527661 CDS
T10780
Symbol
abcc8b
Name
(RefSeq) ATP-binding cassette sub-family C member 8
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128527661 (abcc8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128527661 (abcc8b)
Transporters [BR:
cgar02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
128527661 (abcc8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_29
nSTAND1
DEAD
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
128527661
NCBI-ProteinID:
XP_053356098
LinkDB
All DBs
Position
7:complement(33435920..33469899)
Genome browser
AA seq
1611 aa
AA seq
DB search
MHGYRATPISNSTLSFCGTDNSSAYKVDNGLLNNGCFLDALGLVPHVFLLFSTFPILFIG
WGSQSSKVHIHHSTWLHFPGHNLRWLLTTALLFVLVCEVAEGIVSDGFNQSHHIHLYMPA
GLGILAAITSIVYYHNIETSNFPKLLLALLIYWILAFVTKTIKFSKYNEHGIGLGQLRFC
ITSLLALIYGLLLTVEISVILRRRYIFFLFPNEVKPPEDQQDLGVRFLQPFVNLLSKSTY
WWMNTFITSAHKQPIDLKTIGKLPIAMRALTNYQKLRSAFSALKERGMIPARGPQSIWYA
LRQAFGGPLLLSITHRFLADLLGFAGPLCISGIVHHISRDNHTIEPPVKLLGIHFISSQA
FLANGYVLAVLLFLALLLQRTFLQASYYAAMETGIKIKGAIQCKIYNKIMRLSTSNMSMG
DMTTSQICNLVARDTEQLMWFFFLCPNLCAMPVQITLGVFLLYYLLGISALIGAAVIAVL
APLQYFVATQLSRTQKSTLEYSSERLKKTNEMLRGIKLLKLYAWEHIFRSSVEETRKKEL
TSLRAFALYTSLSIFINAAIPIAAVLTTFVVHAYVHYSTETALSPAVAFASLSLFHILVT
PLFLLSSVLHSTVKALVSMQKLSEFFDSEEITLDQEPKTPTPTDTNKHSNSNIKSVYMLQ
LQASKLVNRKNKAKQDKNSHMQRDLSLDLANVREEDICFKIVNGYFTWTQGCPTLTNINI
KVPFGALTMIVGQVGSGKSSLLLAALGEMQKISGSVTWNKLPDQEEEENYRLPVNHNAGP
KAPEKRGSVAYASQRPWLLNATVEENILFSMAPNKNRYAEVIEICQLQTDIDTLPQGDQT
VVGDRVSLSLSQGIILSGGQRQRISVARALYQQTKVVFLDDPFSALDIHLSDHLMLEGIL
KFLRQEKRTVVLVTHKLQYLPHADWIIAMKDGTVQTQGSLKDIQCAEPELFEHWKTLMNR
QDKENAVRLKRKSFKRMYSRDTIATEDEDEASSLTVREVKDGSLSTDEDSLTTELRQRNT
MLWGSLVTYLRTAGLLLLPLLILSQLTKHSLMLAIDYWLAHWTSQSIIAQTGSTERNCTS
GSTQDCVLSHTLYLQVFCVLCFLGIVLCLITSLAVEWTGLRVAQELHCGLLHIIILAPMR
LFETTPLGNILNRFSGDTNIIDQHIPVTMECLSRSTLLCVSAVGIISYITPVFLIALLPL
AIICYFIQKYFLVASRDLQQLEDITQIPLLSHYTVTIEGLTTIRAFRHEQRFKKRLLEYA
DANNIASLFLTAANRWLEVRMEYIGAFVVLIAAVASIGSALYSDLSAGLVGLGLTYALMV
SNYLNWMVRNLADMEVQLGCVKRISSLLNTEPENYNGEMTPAQVPAGWPKYGEIQIKNLS
VRYDSSLKPVLKHVNAHIKPGQKVGICGRTGSGKSSFSLALFRMVDTCEGQIIIDGIDIA
KLPLQTLRSKFSIILQDPILFSGTIRFNLDPERKVTDRMLWEALTIAQLTPVVEALPGGL
DAMVTEGGENFSQGQRQLFCLARAFVRKSSILIMDEATASIDMATDGILQKVVMTAFADR
TVVNIAHRVHTILGSDVVIVMKRGAILEYDRPDVLLEQKDSVFYTFVRADK
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgcatggatacagagctactccaatctccaatagcaccctgtctttctgtggtactgat
aactcgtctgcctataaggtggataacgggcttctgaataacggctgcttcctagatgcc
ctggggcttgtgccacacgtttttctcctcttcagcaccttcccaatactcttcattggt
tggggcagccagagctctaaggttcatatccatcatagcacatggctgcacttccctggc
cataacctgcgctggttgctcacaaccgctctcttgtttgtgctggtgtgtgaggttgct
gaggggattgtctcagacggatttaaccagtctcaccacatccatctttatatgcctgct
ggactgggaatcctggcagctataacctccatagtttactatcacaacatagagacgtct
aactttcccaaattgctgttagctttgcttatctactggattttggcttttgtcaccaaa
accattaagttctctaagtacaatgaacacggaatcggcctggggcagctgcgcttctgc
atcacaagcttgctggctttaatctacggcctgctgctgactgtggagatcagcgttata
ctgcgcaggcgctacatattctttctattcccgaacgaggtgaagcctcctgaagaccag
caggaccttggtgtgcgtttccttcagccttttgtcaacctgctgtccaagagcacatac
tggtggatgaacacattcatcacatcggctcacaaacagcccattgacctgaaaaccatt
ggcaagctgcccatagctatgagagcactcactaactaccagaagctacgttcggccttc
agtgccctaaaggagcgaggtatgatccctgcacgaggcccacagtcaatttggtatgct
cttaggcaggcttttggaggccctctactccttagcataacccatcgtttcctggctgat
ctgctgggcttcgctggaccactctgcatctctggaattgtccaccacatcagccgtgat
aatcacaccatcgagccaccggtcaaactgctaggaatacatttcatttcctctcaggca
tttctagcgaacggctatgtgttagcagtgctgctctttctagctttgctcctccagagg
acattcctacaggcgtcctactatgccgcaatggagactggcattaaaatcaagggcgcc
atccagtgtaagatctacaataagatcatgcgcctgagtacctccaacatgtccatggga
gacatgaccacctctcagatctgcaatctggtggcgagagacacagagcagctcatgtgg
ttcttctttctgtgtcctaacctgtgtgcaatgccagtgcagatcacacttggtgttttc
ctgctgtactacttattggggataagtgctctgattggagctgctgtaatcgctgttctt
gcaccgttgcagtactttgtagctacacagctttcacgaacacaaaaaagcacactggag
tattccagtgagagactgaagaagactaatgagatgttgaggggcattaagctgctgaaa
ttatatgcctgggagcacatctttagatccagcgtggaggagacaagaaaaaaagagctg
accagccttcgggccttcgccctctacacatcgctctccattttcattaatgcagccatt
ccaattgcagcggttcttacaacgtttgtagtgcatgcgtacgtgcactactctacagaa
actgctctctctcctgctgtggcgtttgcttctctctcactcttccacatcttggtcaca
cccctcttcctgctttctagtgtactgcactccactgttaaggcgcttgtaagcatgcag
aaactaagtgaattctttgatagcgaagagattacacttgaccaagaacctaaaacaccc
acgcccactgatacgaacaagcacagcaacagcaacataaagtcagtttacatgttgcaa
ctccaggcctcaaagttggtaaaccggaagaacaaagccaaacaggacaagaacagtcat
atgcagcgggatctgagtctggacctggctaatgtaagggaggaagatatctgtttcaag
attgttaatggctacttcacctggacacagggatgtcccactctaaccaacattaacata
aaggttccttttggtgcattgactatgattgttgggcaggtaggatctggaaaatcctca
ctgctcttagctgctctgggggaaatgcagaagatctcagggagtgtcacatggaacaaa
ttaccagatcaggaggaggaagagaattacagattgcctgtgaatcacaatgcaggccca
aaagctcctgagaagagaggttcggtggcctacgcgtctcagaggccatggcttctcaat
gccacagtggaggagaacatcttgttcagcatggcccctaacaagaaccggtacgcagaa
gtgattgagatctgccagctccaaaccgatattgacacacttccccaaggagaccaaact
gtggttggagatagggtttctttatctctttctcagggcataattctgtctggtgggcag
cggcagcgcatcagtgtagccagagctctttatcagcaaactaaagtggtgttcctggat
gacccattctcagctctggacatccacctgagtgaccacttgatgctggaaggaattctg
aagttcctcagacaggagaaaaggacagtggtgctggtcacacacaagctgcagtactta
ccacatgcagactggatcatagccatgaaggatggtacagtccagacacaaggctcccta
aaggacatccagtgtgctgagcctgaactgtttgaacactggaaaaccctaatgaacaga
caggacaaggagaatgctgtgagactgaagaggaaaagtttcaagaggatgtactccaga
gacacaattgccactgaggatgaggatgaagcctcttctcttactgtcagggaggttaaa
gatggttccctgagtacagacgaggacagcctgacaactgagctgcgtcagaggaacaca
atgctatggggctcactggtgacataccttcgaacagctggcctcctgctgcttccactg
ctcatcctgtcccagctcacaaaacactcactcatgctggcgatagactactggctggcc
cattggacgtctcagtccattatagctcagacaggcagtacagagaggaactgcacatcc
ggtagcacacaggactgtgtgctgagtcatactctgtacctgcaagtcttttgtgtcttg
tgttttctgggtatcgtgttatgtttgatcacctctctggctgtggagtggacgggtctg
cgagtcgctcaggagctccactgtggtcttcttcatatcatcatcctcgctccaatgagg
ttgtttgagacgactcctcttgggaatattcttaaccgattttctggagacacgaacatc
atcgatcagcacatcccggttaccatggagtgtttgagccgttcgactctgctgtgtgtg
tcagctgtgggcatcatatcctacatcaccccagtcttccttatcgctctgctcccactg
gcaatcatctgctactttattcagaagtacttcttggtggcatccagggatctgcaacag
ttagaggacatcactcagatccctctgttgtcccactacacagtgactatagagggactc
accaccatcagggcctttagacacgaacaaagatttaagaagagacttttggaatatgca
gatgccaataacatcgcctcgctctttcttacggcggcaaatcgctggcttgaagttcgc
atggagtacattggggcgtttgttgtcctgatagcagctgtggcgtccatcggcagtgcc
ctgtacagcgatctctctgctggattagtgggtctgggccttacatatgctctcatggtg
tcgaactacctgaactggatggtgcgtaacctggctgatatggaggtacagctcgggtgt
gtgaaaaggatcagcagtctgcttaacacagagcctgagaactacaatggagaaatgact
ccagcccaggttccagcaggctggcccaaatatggcgagatccaaatcaagaacctgagc
gtgagatatgatagcagcctaaaacctgtcctaaagcatgtcaatgctcacatcaaacct
ggacaaaaggtggggatatgcggacgaacaggaagtggaaagtcttccttctccttggct
ctgttccgaatggtagacacatgcgagggtcaaattatcattgatggaattgatattgct
aaactgccccttcaaaccttgcgctcaaaattttccatcattcttcaggaccccatttta
ttcagtggaacaattcgatttaatctggatccagagagaaaagtcactgaccggatgctg
tgggaagcgttgactatcgctcagctcacgcctgtggtggaagctttacctggaggacta
gatgccatggtgacggagggaggcgaaaacttcagccaggggcaacggcagctcttctgt
ctggctcgagcctttgtaaggaagagcagcatcctcatcatggatgaagccacagcatcc
attgacatggctactgatggcatcctacaaaaagttgttatgactgcttttgcagatcgg
acagttgtaaacatcgcccatcgtgtgcacaccatactgggctcagacgtggtcattgtg
atgaagcgtggagccattctggaatatgaccgacctgatgtcttgctggagcagaaagac
agcgtcttctatacttttgtcagagcagacaagtga
DBGET
integrated database retrieval system
