Clarias gariepinus (North African catfish): 128527714
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Entry
128527714 CDS
T10780
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04115
p53 signaling pathway
cgar04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128527714 (cop1)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128527714 (cop1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128527714 (cop1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128527714
NCBI-ProteinID:
XP_053356198
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Position
1:41685217..41706115
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AA seq
690 aa
AA seq
DB search
MSGCRQQQQPGGTSGSVPGTSAGSTATANSANTGGSSANANGNGVSSRSLGSEAQLQGAQ
RSGHSKKRPLYNGLINPYEDKSNDFVCPICFDMIEEAHMTKCGHSFCYKCIRRSLEDSNR
CPKCNYIIDNVDQLYPNFLVNELILKQKQRCEEKRLKRDHPNGTKWQFFQDVLGTDQEHL
DLANVNYMLELLVQKKKQLEAESQAAQRQILMEFLKEARRNKREQLEQLQKELNFLEEDI
KSVQDMSGLYSPVMDMDPNLDSTVPQFGEAHSPAPSCSIIENTDYIQPPQFGASSQVNLP
KGKRQTSYNSTLASRRKRLTAHFEDLEQCYFSNRMSRITDDSRTVNQLDDFMECLSKFTR
YNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVFEYGTVIQDAVDIH
YPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDF
NLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPTSRYHLAFGCADHCVH
YYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLWNVNKPHCLRSFKGHIN
EKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDKKEDDTNEFVS
AVCWRALPDGESNVLIAANSQGTIKVLELI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggctgtcggcaacagcagcagccgggcggtacttcggggtctgtaccgggaacg
agcgcggggagcacggccactgctaacagtgctaataccggagggagcagcgctaatgct
aacggcaacggcgtttcttcacggagtctcggcagcgaggcgcagctccagggcgcacag
agatccggccacagcaagaagagacccctgtacaacggcctgattaatccgtatgaagat
aaaagtaatgatttcgtgtgtcccatctgtttcgacatgatagaggaagcgcatatgact
aaatgcggtcacagtttctgttataaatgtatacgacggagtttagaggacagcaacaga
tgtccgaaatgtaattacattattgacaatgtggatcagctgtaccccaacttcttagtt
aatgagctgatcctcaaacagaaacagagatgcgaagagaagcgactgaaacgggaccac
cctaatggaaccaaatggcagtttttccaagatgttcttggcacagaccaggagcatctg
gatttagcaaatgtcaattacatgttggagctgctggtgcagaaaaagaaacagcttgaa
gcggaatcacaagcagctcagcgtcaaatcctaatggagttcttgaaagaagctagaaga
aataagagagagcaactggagcaattacagaaagaattgaactttttggaagaggacata
aagagtgtccaggatatgagtgggctgtactcaccggttatggatatggaccccaacctg
gacagcacagttccacagtttggagaagcacactctcctgcacccagctgtagcatcatt
gaaaacacagactatattcagcctccccagtttggagcaagctcacaggtaaacttgcca
aagggtaaaagacagacatcatacaatagcactctggcctctcggaggaagcggctaaca
gcgcactttgaagacctggagcagtgttacttttcaaacaggatgtcgcgtatcacagat
gacagccgaactgttaaccagctggacgacttcatggagtgtctctccaagttcacacgt
tacaactctgtacgccctctggccactttgtcttatgcaagtgatctctacaatggctct
agtattgtttctagtattgagtttgaccgtgactgtgattatttcgccattgctggtgtt
accaagaaaattaaagtttttgaatatggaacagtgatccaggatgctgtggacattcat
tatcctgtcaatgaaatgacgtgcaactctaaaataagctgcattagctggagtagctac
cacaagaacctgttggcaagcagcgactatgagggaactgtgattctttgggatggattt
acagggcagaggtcaaaagtttatcaggagcatgagaaaagatgttggagtgttgatttc
aatcttatggatcccaaacttttggcttcaggctcagatgatgcaaaagtcaagttgtgg
tctactaacctggataactcagttgccagcattgaagctaaggccaatgtgtgctgtgtc
aaattcagcccaacatctaggtatcaccttgcatttggctgtgcagaccactgtgtccac
tactatgatttgcggaacactaagcagcctatcatggtcttcaaaggtcaccggaaggct
gtgtcctatgccaagttcgtcaatggagaagagattgtgtctgcctccacagatagccag
ctaaagctgtggaatgtgaacaagcctcactgcctgcgctctttcaaaggccacattaat
gagaaaaactttgtaggtctggcctccaatggagactatgtagcatgtggaagtgagaac
aactccctatacctgtactacaaggggctctccaaaacattgctgaccttcaagtttgac
actgtgaagagcgttctggacaaggacaagaaggaagacgacactaatgagtttgtcagt
gccgtatgctggcgggcattaccagatggggagtcgaatgtcctgattgcagccaacagt
caagggacaatcaaggtactcgagctaatttga
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