Clarias gariepinus (North African catfish): 128527720
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Entry
128527720 CDS
T10780
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128527720 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128527720 (chrna5)
Ion channels [BR:
cgar04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
128527720 (chrna5)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF1802
Motif
Other DBs
NCBI-GeneID:
128527720
NCBI-ProteinID:
XP_053356214
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Position
7:34710554..34720456
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AA seq
472 aa
AA seq
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MLQAQISLSRLVVLTCSCLICSILAQRKISSYAKTEDKLLRNLFSKYQKWVRPVETLNGT
VRVKFGLAISQLVDVDEKNQLMTTNVWMKQEWVDAKLRWNPKQYLGITYIRVPSDLIWIP
DIVLYDNADGHFEATATKAVVKHDGTVSWTPPATYKSACTIDVTFFPFDLQNCSMKFGSW
TYDGSQVDILLEDVHVDKRDYFDNGEWEIVTATGSRGLRMDTTGSYPFITYSFIIRRLPL
FYTLFLIIPCIGLSFLTVLVFYLPSNCGEKISLCTSVLVSLTVFLLVIEEIIPSSSKVIP
LIGEYLVFTMIFVTLSIIITVFAINIHHRSSSTHNDMAPWVRRVFLHSLPKLLCMRSHVD
RYAATGGSHRAGGTADLDCGKSLKEDSSLLLDSAAHKLQAALESIRYITLHVVKENEVRE
VVQDWKFVAQVLDRVFLWVFLSVSVLGSALLFIPVIYKWAKIIVPNNGNHSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgctacaagctcaaatctcattgtcccgtctggttgtactcacctgctcctgtctcatc
tgctccatcctggctcaacgcaagatatcctcgtatgccaaaaccgaggacaagctgttg
aggaatcttttcagcaaataccagaaatgggtacgaccagtggaaactctgaatggaaca
gtacgggtgaaatttggactggccatctcacagctggtcgatgtggatgagaagaatcag
ctgatgaccaccaatgtatggatgaagcaggaatgggttgacgccaagctgcgatggaac
cctaagcagtacctgggtattacgtatatcagagtgccatctgacttgatatggattcca
gacattgtgctatatgacaatgcagatggacattttgaggccacggcaactaaagctgta
gtgaagcatgacggcactgtctcctggacgccacccgccacctacaagtcagcctgcact
attgatgtcaccttctttccctttgaccttcagaactgctccatgaagtttggctcatgg
acctacgatggctcacaggtggacatactcctggaggacgtccatgtggacaagcgggac
tactttgacaatggcgaatgggaaatcgtgacagctacgggaagccgtgggttaagaatg
gacacgacaggctcctatccctttatcacttattccttcatcatccggcgtctgcctctc
ttttacacactctttcttattattccctgcattgggctctccttcttgactgtgttagtc
ttctacctgccttctaattgtggagagaaaatctctctttgtacatcggttctcgtctcg
ctcaccgtgttcctcctggtgatagaggagatcattccgtcttcctcaaaggtcatccca
cttattggcgagtatctagtcttcaccatgatctttgtcacactctccatcatcatcaca
gtcttcgccatcaatattcaccaccgctcttcttccacgcataatgacatggcaccctgg
gtacggcgtgtcttcctgcacagtctaccgaaactgctttgcatgcgcagccacgtggac
cgctacgcggcgacaggagggagtcatcgagctggaggaacagcagatctagactgtgga
aagagcttaaaagaagacagcagccttctgctagactcagcagcacacaaacttcaagca
gcactggagtcgatccgatacatcactctgcatgtggtaaaggagaatgaagtcagagag
gttgttcaggactggaagtttgtggcacaagttctagaccgcgtcttcctgtgggtcttc
ttgtcagtgtctgtgctaggttctgctctgcttttcattcctgtcatttacaaatgggcc
aaaatcattgttccaaacaatggtaatcacagtagctaa
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