Clarias gariepinus (North African catfish): 128527721
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Entry
128527721 CDS
T10780
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03022
Basal transcription factors
Brite
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128527721
Coactivators
SAGA/TFTC/STAGA complex
128527721
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128527721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128527721
NCBI-ProteinID:
XP_053356215
LinkDB
All DBs
Position
7:9293916..9409219
Genome browser
AA seq
1050 aa
AA seq
DB search
MAGASDPLEEMLFSEVDEKAVSDLVGSLESQLVGRGGNKTGAAKQHLGKALASRANSTSE
QQQQQHPHPHHQQQHKAGTERGSDPAGITPSPESCVKASTSGARSHSSFSDKVSGVCAQD
GVPFPAGSVSAAGRRAAAAGSSSVETPRHYGTRKKRGGGARGGAAAASRSMNGAATSSAR
SGNSPPSGAVSMATPRANSTTTTTTTYTVSSASRSVALDKGTPRIALHRLPSHIVASIAQ
GRNGTSVSALVQQGRVHHAKNAESADTKGEVHQGEPGSVNSVPGTVCIAVTQSQPQSQTQ
PQSQSRLQSQLHSKPQFLSKPQTQSQPKSQSQSQPQLQSQSKSQSQSQPQLQSQSKSQSQ
SQSQPHSQSQTQPKSQSGTQSQPSQSQPQSQSQPQPQPQSQSLPQSQPQSQPQSQSQPQS
QPQSQSQPQPQPQSQSLPQSQPQSQPQSQSQPQSQPQSQSQPQSQAQSQPQSQPQSQSQP
QSQPQPQSQSQPQTQPQIVSQPQTRLQTPPQTQPQLQPQPRPAAPAQRITTPQLLVRPPQ
QQATIQLPPGFTIPAGMVLVRTELGQLMMVPQQALAQAQAQSAISPRPAAPTTTATFRVT
TPQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIEPEEFTSRLQTE
LKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPPQPPQPKTTAPPTGAVAGAVTTSNVP
RQPNSTITPSQNIKRTGTIGGQVRMPVVIAQTVRPAGAVGKSPAVQAGKIPSGVSVQLPG
AQKNKVNDPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTQIRSCKDEAFLP
TGLLHRRILETAKKFGVTEVPLEAVNFIAHATQTRLRTVLEKVSFIAQHRMDSNKDEEWY
EQTSDVRSQLKFFEHLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQ
ELAQIRQRDANLTALAAIGPRKKRKVDSPGATPGTEVSGSSAGSPASSLSSSRQFHRQRI
TRVNLRDFIFYLEQERETSRSLLLYRALLK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagagatgctgttctctgaggtggacgagaaggcg
gtgagcgacctggtgggctccctggagtcacagctcgtcggccggggtggaaacaagact
ggtgcggctaagcagcacctaggaaaagccttagcctctcgggctaatagtacatccgag
cagcaacaacaacaacatcctcatcctcatcatcaacaacagcataaagccgggacggag
cgcggctcggaccccgccgggatcactccatcaccggagagctgcgtaaaggcgagtacg
agcggtgcgcgttcacactcctccttctcggataaggttagcggcgtgtgcgcgcaggat
ggagtgccgtttcccgcgggtagcgttagcgccgccggccggagagcagcagcggctggc
tcgagctccgtggagacgccgcggcattacggcacgcggaagaagcgcggtggtggtgcg
cgcggcggcgctgccgccgcttcgcggagcatgaacggcgccgcgacctcctccgcgcgc
agcggcaactcgccaccgtccggcgccgtttccatggcgacgccgcgcgccaactccacc
accaccaccaccaccacgtacaccgtgtccagcgcgagccggtccgtcgcgctggataaa
gggactcccaggatcgcgctgcaccgactcccgagtcacatcgtggccagcatcgctcag
ggcaggaacggcacgagcgtgtccgcgctcgtccagcaagggcgcgtgcaccacgcaaag
aacgcggagagcgcggacaccaaaggggaagtgcatcagggtgaacctgggagtgtgaac
tcagtaccgggtactgtgtgtatcgccgtgactcaatcccagcctcagtctcaaacccag
cctcagtctcaatcccgacttcaatcccaacttcattccaaacctcaatttttatctaaa
cctcagactcaatcccagcctaaatcccaatcccaatctcaaccccaacttcagtcccag
tctaaatcccaatcccaatctcaaccccaacttcagtcccagtctaaatcacaatcccaa
tctcaatcccaaccacactctcaatcccaaactcaacccaaatctcaatccggaactcaa
tctcaaccttctcaatctcaaccgcaatctcaatcccaacctcagccccagccgcaatct
caatccctacctcagtcccaacctcaatctcaaccgcaatctcaatctcaacctcagtcc
caaccgcaatctcaatcccaacctcagccccagccgcaatctcaatccctacctcagtcc
caacctcaatctcaaccgcaatctcaatctcaacctcagtcccaaccgcaatctcaatcc
caacctcagtcccaagctcaatctcaacctcagtcccaaccgcaatctcagtcccaacct
cagtctcaaccccagcctcagtctcaatcccaacctcaaacccaaccccaaattgtatcc
caacctcaaactcggcttcaaactccgcctcaaacccaacctcagctccagcctcagcct
cgacctgcagctccagcacagaggatcacaactccacagctgttagtcaggccgccgcag
cagcaggccaccattcagcttccgccaggatttaccatcccggcaggcatggtgttggtg
cggacagagctgggtcagttaatgatggttccacagcaagcgcttgcccaagcccaggcc
cagagcgccatctcaccccgaccagctgcccccaccactacagccaccttcagagtaacc
accccacaggaaatgcaagagaacgtgaaaaagtgtaagaacttcctggcgacgctgatc
aaactcgcatcccataattccccgtcaccggagacgtcacggaacgtcaaagcgctggtg
caggaccttctggatgccaaaatagagccagaagagttcaccagccggctgcagacggag
ctgaagtcatcaccccagccttacctggtgccttttctcaagaaaagcctcccagcgttg
cgtttgtccctgttgaacagtcagcagtcgctcactcagcccccacagcccccacagccc
aagaccacagcgcccccaacaggagccgtcgccggggctgttaccacaagcaacgtgcct
cggcaacctaacagcaccattacaccatcacagaatattaagaggacagggacgatagga
gggcaggtccgtatgcccgtggtcatcgcgcagacggtgcggccggcaggtgctgtaggg
aagagtccggcggtgcaggcggggaaaatcccctcgggggtcagcgtgcagctcccgggg
gctcagaagaacaaagtaaacgatcctgggggaggctctttcagagacgatgatgacatc
aatgacgttgcgtctatggccggggtaaacttgagcgaggagagtgctcgtatcttagca
accaactcagagctggtgggcacgcagatccgctcttgtaaagatgaggccttcctgccc
acgggtctactgcatcggcgcatactggagacggctaagaagttcggggtgacggaggtt
cctcttgaggcggtaaacttcatcgctcacgccacacagacacggctgaggaccgttctg
gaaaaagtgtccttcatcgcccagcacaggatggactccaataaggacgaggagtggtac
gagcagacgtcagacgttcgctctcagctcaagttcttcgagcatttagagcggctggag
aaacagaggaaagacgaacaggagagagagatcctcctcaaagcagccaaaagtcgctcg
aggcaggaggacccagagcaggctcgtttgaagcagaaggcaaaagagatgcagcagcag
gaactggcccagataaggcagagggacgcgaacctcacagctctcgccgccatcgggccg
cggaaaaaacgcaaagtggactcgcccggagcgacgccgggcacggaggtgtcagggagc
tcggcgggttctccggcatcgtcgctgtcgtcctcgcgccagttccaccggcagagaatc
acacgcgtgaacctcagggatttcatcttctacctggagcaggagcgagagacgagccga
tcgctcctgctctaccgtgctctgctgaagtag
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