Clarias gariepinus (North African catfish): 128527769
Help
Entry
128527769 CDS
T10780
Symbol
slx1b
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128527769 (slx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128527769 (slx1b)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128527769 (slx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
T5orf172
zf-RING-like
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
128527769
NCBI-ProteinID:
XP_053356317
LinkDB
All DBs
Position
1:34969504..34974321
Genome browser
AA seq
263 aa
AA seq
DB search
MVVEVESFYGVYMLYCTNPKFKGRIYIGFTVNPERRIGQHNGGKHKGGAKKTSGRGPWEM
VLIIHGFPSDIAALRFEWAWQHPHISRRLSHVTRRTRKESSLQFHWRVLSNMLRVAPWSR
LPLTVRWLRQEYRLEFEPQLQPPLHIPLTFGCVRAKKKQQQEDKQQEEIQLDRCLLCRGI
VQTADRLSCFHPSCKMVCHLTCLAKHFLKSDPGHLLPVEGECPGCRHSLLWGSLIRHKNG
CYGDLEEITSNSSQNHWADELQI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggttgtagaggtggagagcttttatggggtgtacatgctgtactgcaccaaccccaaa
tttaaggggcgcatttacatcggattcactgtaaaccctgagcggaggatcggacaacac
aacggcgggaaacacaaagggggagccaagaagaccagcgggagaggaccctgggagatg
gtgctaatcattcatggctttccgtctgatattgctgctctacggtttgagtgggcgtgg
cagcatccacatatctctcgccggctctcccacgtgacccggcgcacacgaaaagagtcc
agtctgcagtttcactggcgtgtgctttcaaacatgctgcgggtggcgccatggagtcgc
ctacccctgactgtgcgctggctgaggcaggaataccgtctggagtttgagccacagctg
caaccgcctctgcacatccctctgacctttggctgtgtacgagctaaaaagaaacaacag
caagaagacaagcaacaagaggagatccagctggaccggtgtctgctgtgtagagggatt
gtgcagactgcagatagactgtcttgcttccatccctcctgtaagatggtctgtcatctg
acttgcttggcaaaacatttcttaaagtccgacccgggtcacctgcttcctgtagagggc
gagtgcccaggctgccgtcactcattgctttgggggagtttgattcgccacaaaaatggc
tgctacggcgacctagaagagattacttcaaattcttctcagaatcattgggcagatgag
ttgcagatttga
DBGET
integrated database retrieval system
