Clarias gariepinus (North African catfish): 128527786
Help
Entry
128527786 CDS
T10780
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04517
IgSF CAM signaling
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128527786
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128527786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128527786
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128527786
Intermediate filaments
Intermediate filament-binding proteins
128527786
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
Snapin_Pallidin
YdjO
Helical_needle
Motif
Other DBs
NCBI-GeneID:
128527786
NCBI-ProteinID:
XP_053356339
LinkDB
All DBs
Position
7
Genome browser
AA seq
2434 aa
AA seq
DB search
MANAATDLDNAEAQRQLNNNNRPSSTGFWESETTSAKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIHNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQSLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRIGKVLDNAIEAE
KIIQRYEGLASELLEWIEKTISIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERMSAV
VELAVEMESEGYYDIRRIMARKDNILKQWNLLKELVTGRKTRLEKNLALQKTFQEMVYMI
DWMEEMQMKLLSKDFGKHLLEVEDLLHKHALQEADITIQADRVQTLNDAALKFTTIDGYQ
PCDPQVICNRVNHVSTCLEELKHLAGKRRTELEDSRELWVFFQEVEECECWMREKISILN
TQSCGKDLSSVLKLLQKHKSLAGELLARRALLQQTMKKGKQIITQKRLHTAGINDKLMEV
KEDWKRLEDQAAMRLGHLQEALDFFQFSAEMDDQLAWLQDAYRLVSSDDFGHDEFSTQSL
LKKHIRVCEEVDKHCQNVVALRKHTVLLPPYYGELEEVKERIQEVERVYSEVAEVALMRQ
QWLNDALSVYCMFSEVNACELWIDEKEKWLNKMDVPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNLIVQQLLDSNHPSSTEVRGCQDHLNSRWNHMVELVEQKKDYLNSILRIQNYLL
ECSEIKSQIQEKRKAIDATQYSGSDLGSVLALQRRLSTMEGALAVLEPKLIHLQQEAEDL
ATSEPHKAEEILIPFEGVSVEWDELKRTLQGCEDSLTVAGRLQQFIQDLDSFLTWMVQKQ
TEAASNDLPESLDEAERLINLHAALNEEIRSYEEDFERLQAVRELLDSEDTLLANAALHQ
WLQKLSAGWNKLLQMWESRRDELVQAHIYHLFMKDVKQAEAFLNNQESSLAHVELPTTVE
TVEAAIKKHKEFSMAMELNLHRIKAVIEAGESLISQNNIYSERIRDRVDLLITRGNQNRE
VAQQWLRKLTDQWELQRFLQDCHELGDWVMEKMLTARDSTCDDTQQLHKKWLKHQTFMAE
LTQNKDWLDKIQKEGERLMAEKPELSSMVQQKLSEIRECWLELENLTQVKALQLFENDRA
QQIAQNYARLNERVQQLELQLHHCDQGHDLTSVNKQLKKLQMMERQMEEWCNEVCDLQVQ
SSSLPEEYVMTDSVSEHQAEVESRIVRLIEPLKERRRILLASKEVHQVRRDLQDEILWVQ
ERLPLATLQETGSSLQAVQQLMKKNQNLQRELESHRGHVEEVMERASMFSSVRTTEAECV
SALMEDLHSLWGALWAETERKQLHLDSMYQAQQYYSDITEVEAWLSEQELHMMNEEKGKD
ELSTLHLLKKQLSLEQTIEDYAETIGLLSQQCRQLLELGHPDSEQISKRQSQIDRLYVSL
KDLVEERKCRLEQQYWLFQLHREVEELEQWIAEREISASSTELGQDYEHVTILQEKFTEF
ATETGSLGQERVMAVNQMVDELIDYGHADAAIIAEWKDAVNESWAELMELMETRAQMLAA
SHQLHKFFSDCREVIAQISDKHRRLPELQGQPIGTSNTGTLQRLMNTFEQDIQLLVGQVR
QLQESAAQLRTVYAGEKAEAIAMQEYEVMHLWKELIMSCEECRVQITTASDKLRFFSVVR
DQLLWMDSIICQIGTGEKPRDVSSVEVLMNYHQSLKSEVDARNKSMVQCIEMGKTLLATR
NPASEEIKEKLEKVLAKQRELTEKWDKHWEELQHMLEVHQFAQEAVVAESWLSCQEAFLI
SQELGSSVDEVEQLIRRHESFRKAAAAWEERFSSLRRLTTVEKMKAEQSKLPPTPLLGRK
VFLDPQDSSPARSSPSSLHKQTIYEQRDYWGERNMAQPSPPPASRRLGTTVLNCTPIVSG
PGTSSRIQEARNSGLLGIAAGLGVPTELKSTPIKPVREPVRPLIDVNVMAEVVLQEPGCS
GGSRSELQVEQQRPHGKDFRMERQLSNEQLIQARRDELPQEVWRERAEREKRLERQTSSE
QEVYETRRKDRHRLERQESSEHEREPSDKRSGGGGEKRSTLAEIVEQLQEREAAQARGEV
PRLPNGFPEKSSRLDRPRARDRPKPRRRPRPKDGAQGDTRRSRSAPAQSTSSVPQPPSHH
AQREGFLFRKLDIESQKKSSNRWGPFNLKPVACA
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgctgctacggatctggacaatgccgaggcccagagacaattaaacaacaac
aaccggcccagcagcacaggattctgggaaagcgaaaccactagtgctaaactgtttgaa
tgctcacgcattaaggcactagcagatgaaagggatgcagtgcagaagaaaacgttcact
aagtgggtgaactcacacctagcgcgcgtctcatgccgcatcgctgatctgtataacgat
ctgagagatggttacatgctcaccaggttactggaagtgctttcaggagagctactgcct
cggccaacaagagggagaatgcggatacactgtcttgaaaacgtggataaagccttgcag
tttcttaaagagcagagagttcatctggaaaatgttggatctcacgatattgttgatggc
aaccatcgccttacactcggcctcatctggaccattatccttcgcttccagatccaagtg
attaaaattgaaacagaggacaacagggagacacgctcagctaaagatgccctgttactg
tggtgccaaatgaaaacagcagggtatcctgaagtaaacattcacaatttcaccacatgc
tggagagatggactggctttcaatgcacttatacatcgacacaggcctgatttgattgag
tttcacaagttgaccagatcgaatgctacacacaatctgcagcaagccttcaacattgct
gagcagagtcttggactcactaaacttcttgatccagaggatgtgaacactgaaaatcct
gatgagaagtctattataacatatgttgtatcctactaccactacttctccaaaatgaaa
gctcttatagtagagggcaaaagaattgggaaggtgttggataacgccatagaagcagag
aagatcattcagcgttatgaaggtctggcctcggaactgctggaatggattgaaaaaacc
attagtatcatcagcaaccagaagtttgctaactctctaacaggagtacaacaacaactg
caggcctttacaacctactgcaccattgaaaagcctataaagttccaggagaaaggaaat
cttgaggtgctgctctttaccatccaaagcaaacttagagccaacaaccagaagccatat
gtgcctcatgatggaaaacttatttctgacatcaacaaggcgtgggaaagactagagaag
gcagagcatgaaagaggtgtagctttaaggaaggagctcattcgtcaggagaaacttgag
ctacttgctcagcggtttgatcacaaaaccaccatgaggcaggcgtggcttaatgagaac
cagcggcttgtttctcaggataattttggctatgatctgccagcagttgaggcagcaatg
aagaaacatgaagcgattgaagctgacatttcgtcatatgaggagcgcatgagtgcggtg
gtggagctggccgtggagatggagagtgaaggatattacgacatcagacgcattatggct
cggaaagacaacatcctaaaacaatggaatctgctgaaagagcttgtgacgggtcgaaag
actcggctggagaaaaatctagccctgcaaaaaaccttccaggagatggtctacatgatt
gactggatggaagagatgcagatgaaactgctctctaaagactttgggaaacacctgctt
gaggtggaggacctgctgcacaaacacgctctacaagaggcagacatcaccatacaggca
gatcgtgtgcaaacgcttaacgatgctgcacttaaattcaccaccattgacggataccag
ccatgcgaccctcaggtgatctgtaatcgtgtaaatcatgtaagcacttgtctggaggaa
ctgaaacatctggcaggtaaacgtcgcactgagctagaggattctcgtgagctctgggtt
ttcttccaggaagtagaagagtgtgagtgctggatgcgtgagaagatctcaatcttgaac
acacaaagctgcggaaaagacctaagcagtgttctaaagcttctacagaagcacaagagc
ctagctggcgagctgttagctcgacgtgcacttctccagcagacaatgaaaaaaggaaag
caaatcatcacgcaaaaacggttgcacacagctgggattaatgacaagttgatggaggtg
aaggaagattggaaaagactagaggatcaagcagcaatgagacttggccacctgcaggag
gctctagatttctttcaatttagcgctgaaatggatgatcagctagcatggcttcaagat
gcctacagacttgtctccagtgacgattttggtcacgatgagttttctacacagtcgctg
ctcaagaagcatattcgtgtctgtgaggaggtggacaagcactgccaaaatgtcgtagca
ctccgaaaacacacagtgttactgccgccttattatggagaactagaggaagtgaaggag
aggatacaagaagtggagcgtgtgtatagtgaggtggcagaggttgcgctaatgcggcag
caatggctaaatgatgctctttctgtttactgtatgttcagtgaagtcaacgcatgtgag
ctgtggattgatgaaaaggaaaaatggctgaacaaaatggatgttcctgagagacttgag
gatgttgaggtggtcgctcacaggtttgagagcctggaccaggagatgaacagcttgatg
ggaaggatcctggatgtgaaccttattgttcagcagctcttggacagtaaccatcccagt
tccactgaggtcagagggtgtcaggatcacttgaacagcaggtggaatcatatggtagaa
ctggttgagcagaagaaggattatttgaattcaattcttcgaatccagaattatttactt
gagtgcagtgagattaaatcacaaattcaggaaaaacggaaagctatcgatgctacgcag
tattcaggcagcgacctgggcagtgtcttagcgctgcagcgacgtttgtccaccatggaa
ggagctcttgctgttttagagcctaaactcatccatttgcagcaggaagcagaagacctt
gcaacctctgagccacacaaagcagaggagattctgattcccttcgagggtgtgagtgtg
gagtgggatgaattgaaacgtactcttcagggctgtgaggattcgctgactgtagctggc
aggctgcagcagttcattcaggatttagattctttcttgacatggatggtgcagaagcag
acagaggcagcatctaacgacctgcctgagtctttggatgaggctgagaggcttataaac
ctccatgcagctcttaacgaagaaattcgcagctatgaggaagattttgagcggttgcag
gctgtgagggagttgctggactcagaagacactctattagccaatgctgcactacaccag
tggctgcagaaacttagtgcaggctggaacaagctgctacagatgtgggagagcaggagg
gatgagttagtccaggcacacatctaccatcttttcatgaaagatgtcaagcaggccgag
gccttccttaacaaccaggagtcctcattggcacatgtggaactccctactacagtggag
acagtggaagccgccattaagaaacacaaagagttcagcatggcgatggagcttaatctg
cacaggatcaaagctgtaattgaggcaggagagagtctcatcagccagaacaacatctac
tctgagcgcatccgagatcgggtggatttgctcattaccagggggaatcaaaaccgggaa
gtggcgcagcagtggctcagaaaactgactgatcagtgggagctgcaaaggttcttgcag
gactgccatgagctgggtgactgggtgatggagaagatgctaacggcacgtgattcaact
tgtgatgacacacagcagctccataagaaatggctgaagcaccaaacatttatggctgaa
ctcacacagaacaaagactggctcgacaaaattcagaaggaaggtgagcggttgatggcg
gagaagccagagctgagctccatggttcagcagaagctcagtgagattcgtgagtgttgg
ctagagttggaaaacttgacgcaggtcaaagcactgcagctgtttgagaatgaccgtgct
cagcaaatcgctcaaaattatgctcgactgaatgagcgtgtgcaacagctggaactgcag
ctccaccactgcgaccaaggccatgacctcacctccgtcaacaagcagctcaaaaagctc
cagatgatggagcgacaaatggaggagtggtgtaatgaagtgtgtgatctgcaagtgcag
tcctcctctctccctgaggagtatgtgatgacagattctgtgtctgagcatcaggctgaa
gtagagtcgcggattgtacgtctcatcgagcctctgaaggagagacgaaggatcctgctt
gcctccaaagaggtgcaccaagtgcgccgtgacctgcaggatgaaatactgtgggtgcaa
gagagacttcctcttgctacattacaggaaactgggagtagtttacaggctgtgcaacag
cttatgaagaaaaatcagaacctgcaaagggaactagagagccaccgggggcatgtggaa
gaggtgatggagcgagcaagtatgttctcgtcggtgcgcacaactgaggcggagtgtgtg
agcgcattaatggaggacctgcacagcctatggggggcattgtgggctgagacagaacgt
aaacagctgcacttagactccatgtatcaggctcaacagtactacagcgacattacagag
gtggaggcgtggcttagcgaacaggagctgcatatgatgaatgaggagaagggaaaggat
gaattgagtactctacacctgctgaaaaaacagttgtctctggagcagacgattgaggat
tatgctgaaactattggacttttgtcacaacagtgcagacaactactggagctcggccat
cctgacagtgaacagatcagtaaacgtcagtctcaaatcgaccggctctacgtgtctttg
aaggacttggtggaagaaaggaagtgccgtttagagcagcagtactggctctttcagctc
cacagagaggtggaggaactggaacagtggattgctgagcgagagatctcagccagctcc
actgaacttggccaggactatgaacatgtcacgattttgcaggaaaagttcactgagttt
gccactgagacaggaagtctgggccaggagcgagtgatggctgttaatcagatggtggat
gagttaattgattatggccatgcggacgccgccatcatcgctgagtggaaggacgcagtg
aatgaatcgtgggctgaactgatggagctgatggaaaccagagcacaaatgcttgctgca
tcacaccagcttcacaagttcttttccgactgcagagaggtgatagcacagatatctgat
aaacaccggcgattaccagaattgcaggggcagccaattggcacatcaaacactggcaca
cttcagagacttatgaacacatttgaacaagacattcagttgttagttggacaggtgaga
cagttacaggagagtgctgctcagctccgtactgtttacgcaggggagaaagcagaagcc
attgccatgcaggaatatgaagtgatgcatttgtggaaggagctgatcatgtcatgcgag
gaatgccgtgtgcaaataaccacagcatcagataaattgcgatttttcagcgtagtgcgt
gaccagttgttgtggatggatagcatcatctgtcagataggaaccggagagaaacccagg
gatgtctcatctgttgaggtgctcatgaattaccatcaaagcctgaagagtgaagtggac
gctcgaaataagagcatggtgcagtgtattgagatgggaaagacactgctggctacacga
aacccagcttcagaagagattaaagagaaattggagaaagttctggccaaacagagagag
ctgacagaaaaatgggataaacactgggaggaactacagcacatgttagaagttcatcag
tttgctcaggaggcagtggtcgctgagtcctggctctcatgtcaggaggcattcctgatc
agtcaggaactcggtagcagcgtagacgaagtcgagcagctcattcgccgacacgagtcc
ttcaggaaagcagctgcagcctgggaagaaagatttagctcattacgccgcctcactacg
gtagaaaagatgaaggctgagcaaagtaagctgcctccaacgcctttgctgggtcgtaag
gtttttctggaccctcaggattcatctccagcacgcagcagcccttcatcacttcacaaa
cagaccatttatgagcagcgggattattggggagagcgaaacatggctcagccatctcca
ccacctgcatctaggagacttgggaccacagtcttaaactgtacaccaatcgttagtgga
ccaggcacatcatcccgaatccaggaggcaagaaacagcggtctcctggggatcgctgca
ggtcttggagtgcccacagaacttaaaagcactccgataaaaccagtgcgtgaaccagtg
cgccccttaatagatgttaatgtaatggcagaggtagtgcttcaggagccaggatgcagt
ggaggcagtcggtctgaattgcaagtggagcagcaacgccctcatgggaaggactttcgt
atggaacgtcagctttctaacgaacagctgattcaggcgaggagagatgagcttccacag
gaagtatggagggaaagggcagagagagagaagagactagagagacagacatccagcgaa
caggaagtatatgaaactcggagaaaagatcgacatcggcttgagagacaagaaagcagc
gaacatgaaagggaaccatcagataaacgatcaggaggaggaggagagaaacgttctacc
ttagctgaaattgtggaacagcttcaagaaagagaagcagcacaggctcgaggagaggtt
cctcgccttccaaatggatttccagaaaagtcatcgcggctggaccgaccacgagctcga
gaccgtccaaaaccacggagacggccacggcccaaagatggggcacaaggcgatacccga
cgttcgcgctctgctcctgctcaaagcacctcttctgtcccccagccaccttcccatcat
gctcagcgtgagggcttcctcttccgcaagttagacatagagagccagaagaaaagctcc
aacaggtggggtccttttaacctaaaacctgtggcatgcgcataa
DBGET
integrated database retrieval system
