Clarias gariepinus (North African catfish): 128527878
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Entry
128527878 CDS
T10780
Symbol
ddx11
Name
(RefSeq) ATP-dependent DNA helicase DDX11 isoform X1
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128527878 (ddx11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128527878 (ddx11)
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128527878 (ddx11)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
128527878 (ddx11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ResIII
DEAD
NOP19
CDH1_2_SANT_HL1
Motif
Other DBs
NCBI-GeneID:
128527878
NCBI-ProteinID:
XP_053356497
LinkDB
All DBs
Position
7:36061979..36088362
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AA seq
910 aa
AA seq
DB search
MESGDGASRFPFPFKPYPIQERFMEALYAVLEQGKVGIFESPTGTGKSLSLICGALTWLK
DFEEKKRQEAAKLLELTASARDPRLVGGAEKDGDGIAVQEKKENESTTGTDGELDWISEF
LQKKEEREKLNKLKDEEMKRKRREDRLELIRHNTQLKYAMKRKSSENGETEKLLQVSKQD
ASSEAGPNEDDEDGLVVADYESDEDATCKNKLYDEDDDEDLEEEHITKIYYCSRTHSQLA
QFVHEVQKSPYGSTVSLVNLGSRQNLCINPEVARLRSVQMINDRCMELQKNKHDKQNKED
SEAESKRRRGPIKATCAFSGYEKMMAMRDEVLAGVRDIEQLVQHGRDTHTCPYYSTRLAI
PAAQVVVLPYQSLLHAATRKASGIKLKDQIVVIDEAHNLADTITALHSAEITGAQLCRAH
SQLSQYCNRYRSRLKAKNLMYIKQILFVLEGLVRTLGGKVGMNPVTQSTQSGTELLTIND
FLFRAQIDNINLFKLQRYFEKSLISRKLFGFSEKYEGSGVSTHTSSVNKENRRTEGLGRF
LQGLQSKATVPVEPQGSAEDGPMASPMMLVESFLFSLSSANKDGRVVMEKQACLAQSSVK
FLMLNAAVHFAQVLQECRAVVIAGGTMQPVSDFKEQLLLSAGVSSERIAEFSCGHVIPPE
NILPIILCTGPSGQELEFTFQTRDTPQMMEETGRVLSNLCNVVPGGVVCFFPSYEYERRI
LAHWESNGVLQRLAAKKKIFQEPKKASQVEQVLSEYSKCIQRCSNAGGGQSGALLFSVVG
GKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKHMPHVEGKSPGKALIENLC
MKAVNQSIGRAIRHRGDYACIVLCDRRYARAGTLQKLPEWIRSSTRAHGNFGPAFASIRK
FFLEKRQTQP
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggagtccggggacggtgcgagccgcttcccgttcccctttaaaccgtatccgatccag
gagcgcttcatggaggcgttgtacgccgtgctcgagcagggcaaggtgggcatcttcgag
agccccaccggcacggggaagtctctgagtttgatctgcggtgcgttgacctggttgaaa
gacttcgaggagaagaaacgccaagaagccgcgaagctcctcgagctcacagcgagcgcg
cgtgatccacgactcgtaggtggcgcagaaaaagacggagatggaatcgctgttcaggag
aagaaggagaacgaaagcaccactggcactgatggagagctggactggatttcggaattc
ttgcagaaaaaagaagagagagagaagctgaataagttaaaggatgaagaaatgaaaagg
aagaggagagaggaccggctggagttgattagacacaacactcagcttaaatacgccatg
aagagaaaaagcagtgaaaatggcgagactgaaaagctgctgcaggtcagcaagcaggat
gcaagttcagaagcaggacctaatgaagacgacgaggacgggctcgtcgttgcagattac
gaaagcgatgaagacgccacatgcaaaaacaagctctatgatgaggatgatgatgaagat
ctggaggaagagcacatcactaagatttattactgcagccgtacacactcacagctggcc
cagtttgtgcatgaagtgcagaagagtccgtatggatccaccgtcagcttggtcaatctt
gggtctagacagaatctgtgcatcaatccagaggtggcacgactgcggagcgttcagatg
atcaacgatcgctgcatggagctgcaaaaaaataaacatgataaacagaacaaggaggac
tctgaggcggagtctaagcgccgccgtggtcccatcaaagcgacctgcgcgttctcaggc
tacgagaagatgatggcgatgagggacgaggtgctggcaggcgtcagagacatcgagcag
ctcgtgcagcacggccgagacacgcacacctgcccgtattacagcacacgactggctatc
cctgcagcccaggtggtggtgttgccgtatcaatcgctacttcatgctgcgactcgcaag
gcgtccgggatcaaactgaaggatcagatagtcgttatcgacgaggcgcacaacctggcg
gacacgatcacggcactgcacagcgcagagatcactggagcacagctctgcagggctcac
tcacagctctcacagtactgcaaccgctacaggagccgtctgaaggccaagaatctgatg
tacatcaagcaaatcctgtttgtgctggagggactcgtgcgcactcttggagggaaggtg
ggcatgaatcccgtgactcagagcactcagtcaggaactgaacttttaaccattaatgac
ttcctgttcagagcacaaatagacaacatcaacttgttcaagttacagagatattttgag
aagagtctgatcagcaggaagttgtttggattttctgagaagtatgaagggagcggtgtt
agcacacacacaagctctgtgaataaggagaatcgtaggacagaaggacttggacgcttc
ttgcagggacttcagagtaaagctacagttcctgtcgagcctcagggttcagcagaagac
gggccgatggcgtcgcctatgatgcttgtggaaagcttcctgttctctctcagcagcgcc
aacaaggatggaagagtggtgatggaaaaacaagcatgtctggctcagagcagtgtgaag
ttcctgatgctaaatgcagcagttcatttcgcacaagttctccaagaatgcagggccgtg
gtgatcgccggaggaaccatgcagcctgtctccgattttaaggagcagcttctcctgtca
gctggagtctctagtgaacgcattgctgagttttcatgtggtcatgtcatccccccggag
aatattctacccataatcctctgcaccggaccgtctggacaagagctagagtttaccttc
cagaccagagatacaccacagatgatggaggagacagggcgtgttctgtccaacctgtgc
aacgtggttccaggaggcgtggtctgtttcttcccttcctacgagtacgagaggagaatt
ctggcgcactgggagagtaacggcgtcctgcagagacttgcagccaaaaagaagatcttc
caggaaccgaagaaagcgagtcaggtggaacaggtgctgtctgaatactccaagtgcatc
cagcgctgcagcaatgctggaggtggccagtcaggggcgctgttgttctctgtggttgga
ggaaagatgagtgaagggattaacttctccgacgatctgggcagatgtatcgtgatggtc
gggatgccgtaccccaacatcaagtccccagaactacaggagaaaatggcgtatttagac
aagcacatgcctcatgtggagggtaaaagtccagggaaggctttaattgaaaacctgtgc
atgaaggcggtcaaccagtcaataggccgagcgatccgtcacaggggcgactacgcctgc
atcgtgttgtgtgaccggcgctacgcccgcgctggcacgctgcagaaacttcctgagtgg
atccgaagcagcacacgcgcgcacggcaacttcggaccggccttcgccagcatcaggaag
tttttcctggagaagcgacagacgcagccctga
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