Clarias gariepinus (North African catfish): 128527900
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Entry
128527900 CDS
T10780
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128527900 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128527900 (rbm28)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
128527900 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
BUD22
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
128527900
NCBI-ProteinID:
XP_053356524
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All DBs
Position
7:12159556..12180789
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AA seq
778 aa
AA seq
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MEALTLFVRNLPASASSEHLEEIFSEVGPIKRCFVVKDKGSEKCRGIGYVTYSMVEDAER
ALREIKDYDGKKIFVVHAKKKLYEKKQKKNNKAEQKTEESPEEPPEVKSQPKSQGLRKNK
MKARLIVRNLSFKCSEAELKEVFSKHGTVLEVKIPVKPDGKKRGFAFVQFRNMLEAGKAL
AATNLKKIKDRLVAVDWAVSKDKFVANQQGSASGGKKEESAKVAEAEEEDDEEDDVPAEK
QSKVKTENESEAGSPSDNDDDDDDDDDQSKDSDDEEDEKHDDSMESDSDATDDEDDDDDD
EDDEEDDDDDDDDDEEEEKAKKKKKPKNLLPSDVNEGRTIFIRNLSFDSEEEGVEEILLQ
FGELEYVRIVMHPDTGLSKGCAFAQFKTKEGADKCLAAAQTESEGGGVRVDGRKLIMVLA
VSREDASKLKSKTVKTHKGSRNLYLAREGLIRAGTKAAEGVSESDMAKRMRFAELKKAKL
KDVNVFVSQTRLCVHNLPKSVDRKRLFKICLSAAGGGKGVRIKECHVMYDRKPVRGEPVG
QSLGYGFVEFQEHEHALQALRHLNNNPKIFTANKRPIVEFSLEDGRKLKLKAMREQKSKM
TSAAVSRPEKKKGNRVGSQEDRSKQPPQRSPKSVSAVVQKSAGAQKGSEKKPGALSTHFS
GFRTNPEVEHIEAGDGKKRQKILPMPSHIGPKIRNRDKGKKTAQVRKVKTAPSRNERKKL
PSMEKSVQNKTQNAKPVKRKFQNREEDRFERLVEQYKKKLTGGSNSKDSIVKKSKWFS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgttgactttatttgtgcggaatttacctgcatcagcgtccagtgagcatctg
gaggagatcttctctgaagtaggaccgataaagcgctgctttgtggtcaaagataaaggg
tcagagaaatgccgtggtataggctacgttacttactccatggtggaagacgccgagcga
gctctcagagaaataaaagactatgatgggaaaaaaatatttgtggttcacgcgaagaaa
aaactttatgaaaaaaagcaaaaaaagaacaacaaagctgagcagaaaactgaggagagt
cccgaggaaccaccagaggtaaaaagccagccgaagtcccaaggtctgagaaagaacaag
atgaaggccaggcttatcgtacggaatctcagttttaaatgctctgaggctgagcttaag
gaagttttttcaaagcatgggacagtgctggaagttaagatccctgtaaaaccagacgga
aagaaacgaggatttgccttcgtccagtttaggaacatgctggaagcaggaaaagccctg
gcagcaactaacctaaaaaaaatcaaagacagactcgttgctgtagactgggccgtgtct
aaggacaagttcgtggctaatcagcagggttcagcatcgggaggtaaaaaagaggaaagt
gcgaaagtggcagaggctgaggaagaggacgatgaagaggacgacgtgcctgcggaaaaa
cagtctaaggtcaaaaccgaaaatgagtctgaggcaggctcgccatctgataatgacgac
gacgacgacgacgatgatgatcaaagcaaagacagtgatgatgaagaggacgaaaagcat
gatgactctatggaatcagacagcgatgcaacagatgacgaggatgatgatgatgatgat
gaagatgacgaggaggatgatgatgatgatgatgatgatgatgaggaggaggaaaaagcc
aagaagaagaagaaacccaagaatcttctcccttcagatgtgaatgaaggaaggacaata
tttatcagaaacctgtcctttgactctgaggaggaaggcgtagaagaaattcttctgcag
tttggtgaactcgaatatgtgcgaatcgtcatgcatcccgacacaggactctcgaaaggc
tgtgcttttgctcagttcaaaacaaaagaaggagcagacaaatgtctagcagctgcacag
acagaatctgagggtggcggtgtgagggtggatgggaggaagctgatcatggtgctggcg
gtgagcagagaggacgcttccaaactgaaaagcaagacagtgaaaactcacaaaggctcc
aggaacctgtacctcgccagagagggcttgatccgtgccggaaccaaagcagcagaagga
gtttctgaatctgatatggccaagaggatgaggttcgcagagctgaagaaggcaaagctg
aaggacgtgaacgtgttcgtgtctcagacccgcctgtgtgttcacaacctccccaaaagt
gtggaccgcaaacgtctcttcaaaatctgcctgtctgctgcagggggaggaaagggtgtc
cgtatcaaggagtgccatgtgatgtacgaccggaagccggtgcgcggcgagccagtgggt
caatcgttaggctacggctttgtggaatttcaggagcatgaacacgccctccaagccctg
cgtcaccttaacaacaaccccaagatcttcacagccaacaagaggcccattgtggagttt
tcgctggaggatgggaggaagttaaaattgaaggctatgagggagcagaagagcaaaatg
acgtctgcggcagtctccaggcctgaaaagaaaaaaggtaacagagttggatctcaggaa
gacaggagtaagcagcctcctcagagatctcctaaaagcgtctcagctgtggttcagaag
tcagcaggagctcagaaaggcagcgagaagaaaccgggagctctgagcactcacttctca
ggttttaggaccaacccagaagtggagcacatcgaggcgggcgacggcaaaaaacgccag
aagattctccccatgccttcacacattggaccaaagatcaggaaccgggataaaggtaaa
aagaccgcccaggtacggaaagtgaagacggcccccagcagaaacgagagaaagaaactc
ccttcgatggagaaatccgttcaaaataagacacagaatgctaaaccggtgaagaggaag
ttccagaacagggaagaagatcgcttcgagcgtctggtcgaacagtacaagaagaaactc
acaggcgggtcaaactctaaggactcgatcgtcaagaagagcaagtggttcagttga
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