Clarias gariepinus (North African catfish): 128527932
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Entry
128527932 CDS
T10780
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03018
RNA degradation
Brite
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128527932 (ddx6)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
128527932 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
128527932 (ddx6)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128527932 (ddx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128527932
NCBI-ProteinID:
XP_053356573
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All DBs
Position
7:26338820..26353615
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AA seq
484 aa
AA seq
DB search
MSTARTENPVILGLTNQNGQKRGSTKPTGGPGGGGGGPQTTQPAQIKASSAVNNGNSLPV
PTANTVIKPGDDWKKNLKLPPKDMRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKP
SPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCIQALVIVPTRELALQ
VSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRVLDLIKKGVAKVGQ
VQMIVLDEADKLLSQDFVQMMEEILSCLSKQRQILLYSATFPLSVQKFMNSHLQKPYEIN
LMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGY
SCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYL
HRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPSSIDKSLYVAEYHSESAE
EVKL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagccagaacagagaacccagttattctgggcttaacaaaccaaaatggccag
aagagaggctccacaaaaccgacagggggacctggtgggggcggtggtggacctcaaaca
acacagccagcccagattaaagcttccagtgctgtcaacaatggcaactctttgccagta
cccacagcaaacacggtcatcaaacctggggatgactggaagaagaatttaaagcttccc
ccaaaggacatgcgcatgaagacttctgatgtaactgctaccaaagggaatgaatttgaa
gattactgcctgaagcgagagttgttaatgggaatctttgaaatgggctgggaaaaacca
tcacctatccaggaggagagcattcctattgctttgtctgggagagacattctggctcga
gccaagaatggcacaggaaagagtggtgcctacctcattcccttacttgaacgtattgat
ctaaaaaaagactgcatacaagcactggtcattgtccccactagagaactggcgctgcag
gtgagccagatctgcatccaggtcagcaaacacatgggtggggttaaggtcatggcaacc
actggtggaaccaacctccgtgatgacattatgcggcttgatgagactgttcatgttgtt
attgccactcctggaagagtgttggatcttatcaagaaaggagtagccaaagttggccag
gtgcagatgattgtgttggatgaagcagacaagctcctgtctcaggacttcgtgcagatg
atggaggaaattctgagctgcttgtctaaacaaaggcaaattctgctgtactctgcaact
ttcccactaagtgtacaaaagtttatgaattcccatctgcagaagccttatgagataaac
cttatggaggagcttactctgaagggtgtgacccaatattatgcatatgtgactgaaagg
cagaaagttcattgccttaatacactcttctctaggctccagataaatcagtctataatc
ttctgcaactcgtctcaacgagtagagctcctggccaagaaaatctcccagctgggttat
tcctgtttctacattcatgctaagatgagacaggaacacaggaaccgcgtgttccatgat
ttcagaaatggtctttgccgaaatcttgtctgcacagatttgtttacaagaggaattgac
attcaggctgtgaatgtggtgatcaactttgattttcccaaacttggggagacgtatctt
catcgtattggaagatcgggtcgttttgggcatttgggtctggccattaacctgatcacg
tatgatgaccgctttaacctgaagggcattgaagagcagctgggcacagagatcaagccc
attcctagcagcatagataagagtctgtatgtggcagagtatcacagtgagagtgctgag
gaggtcaaactgtga
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integrated database retrieval system
