Clarias gariepinus (North African catfish): 128528017
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Entry
128528017 CDS
T10780
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128528017
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GFIT
Other DBs
NCBI-GeneID:
128528017
NCBI-ProteinID:
XP_053356709
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Position
1:30009299..30028236
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AA seq
1321 aa
AA seq
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MLMFTMDQLNMASFRVSSGSRRFGQQLSMELSSNDLDNKDTFKSMNTEKTSRVTGSIKGT
SGFSEDKVPTVLALQLAIAEGPDWLPADKNTQEVLCGKLRVLEGDLSNISSLISELSAHL
VSINSAERTIFITFKSFEEIWKFTTYHRMGFLRQCLGNLLLDQEFWLNALDQEESGIEIS
VKEEVLNQMYKGFLLQEGSFFGSCTLNQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWTV
LSLADGSRGTKARPALEPVIPFHEWFLKSCPDWVLVGSGKKCCDLPFQIAVGICEATEVY
DGNGPDELSFEAGDLIIIKGLLVTCLEWFMGKLERTGDTGLVKTSLVKATDSLCESHEII
MKQEDQKIFNLEQEKIKNEAIAYLKKTCQSNIATVYKLDSAHPRSIQNGSKNSEYLAVKS
NIANILGEIREHLQNDQTQDSVTLQADKPKGSTESLHDIPHFTVCSEQDSTSPDGYHSLL
TFLGSRDHRPEFQLLYAAYPEFLQLHFQGHSNEEELVSYLGDARETARKKRMSWAQSRIC
FLLGQLCAGRSKFSQARVYYEESLNVPRDYFTDMYLLSAIYSNLSLIYLTQRNSEKYLAL
SERFAALLMTVCDYLSGTEDPEVLKFALKKAVLFQNKPAEARVCFLLAKFYLKLGEGVNA
IPFIERLQILSDEMPGAFDEMRSHVFLLLARLYSDYGLLYLAESSAQQACFQVSSSVNDC
FCSVSLLLENAQELYGVDIPAQVAPCLTRAAALESANMEASLSHAYALCLSWLFHKHGMP
KRAVQYLCDFLNHSSATLLTQSDASTALAWLAWLYICDLQHQSALDVLDSVLSSLPEHCT
TQLEGVIYNMRGITLRHAGDVKQAAENFRAAVDVCEEFENKHNWAIALANFGFLSLQVNA
KRVAEEQLIQAVELFSELEDEDHELNFVVVLLELGKLYITQGFYEKGKFCYEWALLISIL
YENPESQVQATRHLCQLYSEACPDKAQCIIYNEHQLNLLHRRGDRNLEAEILEKISQLYL
SLGTEKANKCALDYTKRSIGLYIDMGRKRKEAHGWLQAGKIYHILKQIELVDLYVQVAQD
IALSTGDTLFILELLEAAGDVFFNSTQDREKAVCFYRDRALPIASKTSSVRCQLRLCNKL
AELLSQLAQYAEALQYAQTALEISVSLADCLNERVAFHRLATLYHCLGQFELAEHHFLKA
LSLCPSPLQFDEEALYYVKVYQTLGDIIFYDLKDPFDAAGYYHLALAAAMDLGNKKSQLE
LCTRLATIYHNFLMNRELSLHFYQRARGFAADLKIRRINLAPDQSFRTTSQYRITPTQET
S
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgttcactatggatcagctaaacatggcgagtttcagggtgagctcgggctca
cgaagatttggacagcagttgtctatggagctctccagcaatgatctggataataaagac
acatttaaaagcatgaacacggaaaagacctcaagagtgacagggagtataaaaggaacc
tcaggattttctgaagataaagtacccacagtgttggctcttcagctggctatagcagaa
ggtccagactggcttcctgctgacaagaacacacaggaagttctgtgcgggaagctgcgc
gtgctggagggtgacctcagtaatatttcatccttgatctctgaattatctgctcatctg
gtgtccatcaacagtgcggaaaggaccatatttatcactttcaaatcatttgaagaaata
tggaagttcaccacataccacagaatgggttttctgcgtcagtgtttggggaaccttctt
ctggaccaagaattctggctgaatgctttagaccaggaagagtcaggaattgagatttca
gttaaagaggaggtcctgaatcagatgtacaaaggctttctgctgcaagaaggatcattt
tttgggagctgcacattgaaccagatgtttgacagctctacatcaggcagtgatctgtat
ctcgaaaagggcgatatcgctctgtttgaacctccatttctgggctcaggatggaccgtg
ctgtccttggcagatggatcaagagggactaaagcacgaccagcactggagcccgtcatt
ccatttcatgagtggtttctgaagtcctgtcctgattgggttttagtaggcagtgggaaa
aaatgctgtgatctcccatttcaaattgctgtaggtatttgtgaggctacagaggtgtac
gatggcaatggacctgatgagctcagttttgaagctggtgatctcatcatcatcaagggg
ctactggtgacctgtcttgagtggttcatgggcaagctggagaggactggtgatacagga
cttgtcaaaacaagccttgttaaagcaactgattctctttgtgaatctcatgaaatcatt
atgaaacaagaagaccaaaaaatcttcaacttggaacaagagaagattaaaaatgaagct
attgcatatttaaagaaaacctgccaaagcaacatcgctacagtctacaaacttgattcg
gcacatccaagatctattcaaaatgggtccaaaaacagtgaatatttggccgtgaaaagc
aacatcgccaatattttaggtgaaataagggaacatcttcaaaatgaccagacacaagac
agtgtgacgcttcaagcagacaagcccaaaggatccacagagtcacttcatgacatcccc
cactttactgtatgttcagagcaggacagtaccagtccagatggataccattccctcctg
accttcttaggcagccgtgatcaccgacctgaatttcagctcctctatgctgcctacccg
gaattcctccagttgcatttccagggccacagtaatgaggaggagctggtatcgtattta
ggtgatgctcgggaaactgcaagaaaaaagcggatgtcatgggcacagagcagaatttgt
tttctcttgggacagttgtgtgcaggaaggtcaaaattctcccaagcacgcgtctattat
gaggaatctttaaacgttcccagagactatttcacagacatgtaccttctctcagccatc
tactctaacctgtccctcatctatcttacacaaagaaactctgagaagtatctcgctcta
tctgaacgttttgcagctttattgatgacggtctgtgattatttatctgggacagaagac
ccagaggtgttaaagtttgcactaaaaaaggcagttctattccagaacaagcctgctgaa
gcccgcgtctgtttcctgctagccaagttttatctgaagcttggagaaggggtgaatgca
atacctttcattgaacggctacagattttatctgatgagatgcctggagcttttgatgag
atgcgaagtcatgtttttttactattagcgaggctttatagtgactacgggcttctttat
ctagctgagagctcagcacagcaagcatgttttcaggtgtcttcctcagtcaacgattgt
ttctgcagcgtctctttactgttagagaatgcccaggaactgtatggtgtggacatccca
gcacaagtggctccatgtttaactcgagctgctgctttagaatctgctaacatggaagct
agcctctcacatgcctatgccctctgtctatcctggctcttccacaagcatggtatgcct
aaaagagcagttcagtacctgtgtgacttcctcaaccattcctctgctacattactcacc
cagtctgatgccagcactgctctggcctggctggcatggttgtatatctgtgacttgcag
caccaaagtgctctagatgtgctggattcggttctgtcctcccttcctgaacattgcaca
acccagctagagggtgtcatctataatatgcgtggcatcactttgaggcatgctggcgat
gtaaaacaagctgcagagaacttccgtgctgcagtcgatgtctgcgaggagtttgaaaac
aagcacaactgggccatagcactcgccaactttggcttcttgagtctgcaagtcaatgca
aagagggtggcagaggagcagctcatccaggcagtggagctgttctctgagctagaggat
gaagatcatgagctgaacttcgtggttgtgcttttagaacttggcaagctttacattaca
cagggtttttatgagaaaggaaagttctgctatgagtgggccctgctgatctctatcctt
tatgaaaacccagagagccaagtgcaagccacccgtcacctgtgccagctgtatagtgaa
gcatgtcctgataaggctcagtgtatcatctataatgaacaccagctgaacctgctgcac
cggagaggagacagaaacctggaggcagagatattggaaaagatcagccagctctacctc
agtctgggcacagagaaagcgaataaatgtgctttggactacaccaaaagaagcatagga
ctctacattgacatggggaggaaaaggaaagaggctcacggctggctccaggcagggaaa
atctaccacatcctgaaacagatagaactggtggatctatatgtgcaggtagcacaagac
attgctttaagcactggagacacacttttcatcctggagctgctggaggcggcaggggac
gtgttctttaacagcacacaggacagagagaaagcggtctgcttctacagggaccgagcc
ctcccgatcgcatcgaagacgagcagtgtgcgatgtcagctcagattgtgcaataagctg
gcagagttactgtcacagctggcacagtatgcagaagccctgcagtatgctcagaccgca
ttagagatcagtgtcagtctggctgattgtttaaacgagcgtgttgcattccatcggctg
gctacgctataccactgcctgggtcagtttgagctggctgagcaccacttcctaaaggcc
ctctctctctgtccgtcacccttacagtttgatgaggaagccctgtactatgtcaaggtc
tatcagacactaggagacattatcttctacgatctaaaagacccatttgatgcagcaggg
tattaccaccttgctctagctgctgccatggacctgggcaataagaagtctcagcttgaa
ttgtgcacacgcctggccactatttaccacaacttccttatgaaccgtgagctctccctg
cacttctaccaacgtgcccgaggctttgccgccgatcttaagatccgccgcatcaacctt
gcaccagatcagagtttccgtaccacatcccagtacagaatcacacctacgcaagagaca
agctag
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