Clarias gariepinus (North African catfish): 128528054
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Entry
128528054 CDS
T10780
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128528054 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128528054 (nup93)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128528054 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
128528054
NCBI-ProteinID:
XP_053356764
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All DBs
Position
7:18014086..18043220
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AA seq
820 aa
AA seq
DB search
MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTFTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDADIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEVGAPGRSALDS
VEVAYGRQIYVFNEKIVNGHVHPNLGDLCASVADSLDDKNVADMWLMVKQMTDVLLVPAK
DTLKSRVSVEMQMAFVRQALTFLENSYKKYTMVTVFGNLHQAQLGGVPGTYQLVHSFLNI
KLPGPLPGMQDGEVEGHSVWALIYYCLRCGDLAAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPNTENKIRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDEDGSSAPQDRLTLAQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELELLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRKF
EATDPREALQYFYFLRNEKDHQGENMFMRCVSELVIESREFEMLLGRLEKDGSRKPGVID
KFAGDTRAIINKVASEAENKGLFEEAVKLYELGKNPDKVLELMNKLLSPVIAQVSAPQSN
KERLKNMALGIAERFRTNGTAGEKSVDSTFYLLLDLMTFFDEYHASHIDRAYDVMERLKL
VPLSQDQVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAAAGTPGRQQRALE
DRDSILRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgagggcttcggggaactgctgcagcaagccgagcagctggcagctgagacc
gaggccgtgtccgagctgcctcatgtcgaacgcaatcttcaggagattcagcaggctgga
gagaggctgcgctctcgcaccttcacgcgaacctcacaggacacagccgatgtcaaagcc
tcaattcttctgggttctagaggactggacatctttcacatctcgcagcgacttgagagc
ctgagtgcagccacgacattcgagccactggaaccagtgaaagatgcagacattcagggc
tttctgaaaaatgagagagacaacgcactgctgtccgccattgaggagtctcgccgcagg
acattcctgctggcggaggaatatcatcgtgagtccatgttggtgcagtgggagcaggtg
aagcagagagtgctgcacactctgctgggggcaggcgaggatgcactggacttcagccag
gatgtggagccgagctttgtaagtgaagtgggagccccaggacgcagcgctctggacagt
gtcgaggtggcttatgggcgacagatctacgttttcaacgagaagattgtgaacggacat
gttcatcccaacctgggggacttgtgtgcgtcagtagctgacagtctggatgataagaat
gtggcggacatgtggctgatggtgaagcagatgacagacgtgctgctggtgccagccaaa
gacacactgaagagccgagtctctgtggagatgcagatggcatttgtccgtcaggccctg
acattcctggagaacagctataagaagtacaccatggtgacggtgttcgggaacctacac
caggctcagttaggcggagtacccggtacttatcagcttgtgcacagcttccttaacatc
aaacttcccggcccactgccaggcatgcaggatggagaggtggagggccactcggtgtgg
gctttgatctattactgcctgcgatgtggagacctggctgcagccatgcaggtggtgaac
cgagcacagcaccagctgggagatttcaagacctggtttcaggagtatatgaacagcccc
gatcgtcgcctggcaccgaacaccgagaataagatacgactgcattatcggcgcgtgttg
cgcaacagtgccgatccatacaagcgtgccgtctactgcctcatcggcaagtgtgacatc
gccgacaaccatggagaggtagctgataaaacagaagactatctttggctcaagctgaac
caggtgtgttttgatgaagatggaagcagcgctccacaggacagactcactctggcccag
ttacagaagcagctcctggaggactacggcgagtctcatttctcagccagtcagcagcca
ttcctttacttccaggtgctctttttgactgcgcagttcgaggcagccgtagcgttcctc
ttccgagtggagcgtctgcgcagtcacgccgtgcacgtggccctcgtcctctacgaactt
gaactattgctcaaatcgtcgggacagagcgcacagctactgagtcaggaaccaggagat
ccccccatggtccgccgcctgaacttcattcgccttctcatgctctatactcgaaaattt
gaggccacagacccacgagaggccctgcagtacttctacttcctgcggaatgagaaagac
caccaaggagagaatatgttcatgcgctgcgtcagtgagctcgtcatcgagagtcgggag
tttgagatgcttctgggaaggctcgaaaaagacggaagcagaaagcctggcgtgattgac
aagtttgccggagacacacgagccatcatcaacaaagtggcctcagaggctgagaacaag
ggcctgtttgaggaagctgtcaagctctatgagttagggaagaaccctgataaggtgctg
gaactgatgaataagttgctgagtccagtcattgcccaggtcagtgcaccacaatcaaac
aaggagaggctcaagaacatggcgctgggtatcgctgaacggtttcgcactaatggtaca
gctggagagaagtctgtggatagtaccttttacctgcttctggacctcatgacctttttc
gacgagtatcacgccagccacatcgaccgtgcatacgacgtaatggagagattaaaactg
gttcctttgagtcaagaccaagtagaggagagggtagcagcattcaggaacttcagcgat
gaagtcagacacaatttatctgaggtgcttctcgcaactatgaacattttgttcacacag
tacaagcgcctgaagggggcagcagcaggaaccccgggcaggcaacaacgtgcattagag
gaccgagactcgatactgcgcagccaggcccgggcactaatcacttttgctgggatgatc
ccataccgcatggccggagacaccaatgccagactggtacagatggaagtcctgatgaac
tga
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