Clarias gariepinus (North African catfish): 128528115
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Entry
128528115 CDS
T10780
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128528115 (irf2bp1)
04121 Ubiquitin system [BR:
cgar04121
]
128528115 (irf2bp1)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
128528115 (irf2bp1)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Atypical E3
128528115 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
128528115
NCBI-ProteinID:
XP_053356844
LinkDB
All DBs
Position
7:27155691..27160317
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AA seq
597 aa
AA seq
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MSSSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIEMLIDTARQLK
RTHVMQDGRSPGPQPGSKHGPGAKDGALDGGRNTAERFERSRGEFVPARLPNGLPRLEDG
VVAEVSRQSPNARRTMVAGVPPNLMPQGLVGTPHGLLIGPRSSGASLAISAPMLSELNKR
HGGGLSFMNPDFEKDLKEKQRNAEALAELSESVRNRADDWAGRPKSVRDTLLALSSCTPF
NVRFKKDHSLLGRVFAFDAKLGVDFELKVFVEYPCGSNNVFSSLLALVKQMFQDSQKDSG
KVISSGFKYVEYEKRHGAGDWHLLSELLSDAVRAFKEPPTPDSLPQPFLDAAYAMLPTAL
CHLGRPVPARMRRRKASPDPEAAERMTSEEQIRQHWYPNVSPHIPTSSLASAMPGHPPNL
QEVVPVSHGSDPSPITALMNVADNVGAISQSPKDVPGSSGAHASSASPSSSGQRRLASRN
GENGSGTATVATAMPPVAATDQGSEISGASGAPLCCTICHERLEDTHFVQCPSVLVHKFC
FPCTRDFIRNQGSGSEVYCPSGDKCPLVGSNVPWAFMQGEISTILAGDVKVKKERDP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctcttcctcctcgcaggcatcttccaggcggcagtggtgttatctatgcgac
ttgcccaaaatgccctgggccatgatctgggattttagcgaagctgtgtgtcgcgggtgt
gtgaattatgaaggtgcagacaggatagaaatgctgatagacacggcgcggcagctgaag
cgcacgcatgtgatgcaggacggaaggtctccaggtccacagccgggtagtaaacacggc
cctggggcgaaagatggcgctctggacgggggcagaaatactgctgagcggtttgagagg
agcagaggagagtttgtcccagctagactacctaatggactgcccaggctggaagatggt
gttgttgcagaagtaagcaggcaaagtcccaacgcgaggagaaccatggtggcaggtgtg
ccgcccaatttgatgccccaaggacttgtgggtacgccgcatggccttttaatcggtccc
agatccagcggtgcatccctggccatatctgcgccgatgctgagcgagctgaacaagagg
catggcggcgggttgtcgttcatgaacccggactttgagaaggacctgaaggagaaacag
aggaacgcggaggcgctggccgaactttccgaaagcgtccgaaatcgggccgacgattgg
gccggacgtcccaaatctgtgcgtgacacgttgttggctctttccagctgcacgccattt
aacgtgcgctttaagaaagaccacagccttttggggagggtgtttgcattcgatgccaag
cttggcgtagattttgagctcaaagtgtttgttgagtacccgtgtggctcaaacaacgtt
ttctcgagcctgttggcgttagtgaagcagatgttccaggatagccaaaaagactcaggc
aaagtgatcagctcgggctttaaatatgtcgaatatgagaagcggcacggtgctggcgat
tggcatcttctttcagagcttctcagtgatgctgtccgggcgtttaaagaaccaccgacc
cctgattcactccctcaaccttttttggatgctgcttatgcaatgttacccacggcactc
tgccatctcggacgtcctgtcccggctcggatgcggcgccgaaaggcttctccagatccc
gaagcagctgagaggatgacatcagaggagcaaatacgccagcactggtatcctaacgtg
agcccacacattccgaccagttctttggccagcgctatgcctggccatcctccaaatctc
caggaggtggtccctgtttcccatggcagtgacccttcaccgatcaccgcactcatgaac
gttgcagacaatgttggtgccatcagccaatcgccgaaagacgtgccaggaagcagtggt
gctcacgcttccagtgctagcccttcttcatctgggcaaaggcgactggcatcacgtaac
ggggagaatggatctggaacagccacagttgccacggcaatgccccctgttgcagcgaca
gaccagggttcagaaatttctggagcatctggagctccactttgttgcaccatttgccat
gaacggctcgaggatacacactttgtccagtgcccttcggtactcgtgcacaagttctgc
ttcccttgtaccagagatttcatccgaaatcagggctcaggaagtgaggtatactgccca
agtggtgataaatgcccattggtgggctctaatgtgccctgggcattcatgcagggagag
atttccaccatcttggctggagatgttaaagtcaagaaggagagagacccttaa
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