Clarias gariepinus (North African catfish): 128528238
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Entry
128528238 CDS
T10780
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128528238 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgar03009
]
128528238 (nob1)
03051 Proteasome [BR:
cgar03051
]
128528238 (nob1)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
128528238 (nob1)
Proteasome [BR:
cgar03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
128528238 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
DZR_2
Zn_ribbon_8
HypA
DZR
Zn_ribbon_15
DUF7129
Motif
Other DBs
NCBI-GeneID:
128528238
NCBI-ProteinID:
XP_053356968
LinkDB
All DBs
Position
7:36482702..36489690
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AA seq
473 aa
AA seq
DB search
MAATTVQHVVADAGAFLKHAALHEIGTNIYTLKDVVNEIRDKQTKKSLAFLPYKLNFKEP
FPEHVRFVTEFAKKTGDYPSLSATDIKVVALTYQLELETSGAAHLKKEPAVKVEVRSTQR
HPEAPVNIAGFHLPPKKSLAASANDVHQPAASRDHQASESSEFNSFQFWRDPVPRIDDDL
LKLLESSGSDVHADAVSREPQTAEVSEFNSFQFWRDPVQSIDEELLNLVDVTEKVQQVDL
TCPCKENGDHGDGVEDEDEEEDDDDGGGWITPSNIKQIQMDAGECCPSEDVTVGCVTTDF
AMQNVLIQIGLNVLSVNGMLIKHTRNYVLRCHACFKTTTNMNKSFCPHCGNDTLKKVAVT
LSEDGNMQMHFSRNPKVLNPKGKRYAIPLPQGGKHSSNPHLVDDQRFPQQRLSRKARAKT
DVFDPDYLAGNSPFSEHDIYSRAAGLHLRDAQCGGGRRRTNPNASRKKFVKRK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccacggtgcagcatgtcgtagccgacgcgggggcttttctaaaacacgcc
gctcttcatgaaatcgggacgaatatctacacactaaaagatgtcgtcaacgaaattcgg
gacaaacagacgaagaagagcttggcgtttttaccctacaaactcaacttcaaggagccg
tttccagaacacgtccggttcgtgactgagtttgcgaaaaagacgggagattatcccagc
ctttcagctacagacattaaggtcgtggctttgacctatcaactggagctggagaccagt
ggagctgctcacttgaagaaggaaccagcagtgaaggtagaagtccgcagcacgcagaga
cacccagaggctccagttaatatcgctggattccaccttcctcctaagaaatccttggcc
gcctcagcgaatgacgttcatcagcctgcagcgtcacgtgatcatcaggcttctgagagc
tccgagtttaacagcttccagttctggagagaccccgtaccccggatcgacgatgacttg
ctcaagctgctggaatcctcaggcagtgacgttcacgctgatgccgtgtcacgtgaacct
cagactgctgaagtctcggagtttaacagcttccagttttggagagatcccgtacagagc
atcgatgaggagttactaaacctggtggacgtcactgagaaagtgcagcaagtggatctg
acgtgtccgtgcaaggaaaacggtgaccacggagacggagtggaagacgaggacgaagaa
gaggacgacgacgacggaggcggttggatcactcccagtaacataaagcagatccagatg
gacgccggtgaatgctgtccgtcggaggacgtcaccgtgggctgcgtgaccaccgacttt
gcgatgcagaacgtgctcattcagatcggcctgaacgtgctgtcggtcaacggcatgctc
atcaaacacaccagaaactacgtcctccgctgccacgcctgcttcaagactactacaaac
atgaacaaatccttctgtccacactgcggcaatgacacgctgaagaaggtggcggtgacg
ctgagtgaagacggcaacatgcagatgcacttctccagaaaccccaaagtgctcaatcct
aaaggaaagaggtatgccattcctctcccacaaggtggcaaacactcgagcaacccacac
ctggtggatgatcagcgtttccctcagcagcgactctctcgtaaggcgcgggcgaagacg
gacgtgttcgacccggactacctggccggcaactctccgttctccgagcacgacatttac
agccgggcggcgggtttacacctgcgggacgctcagtgcggaggaggaagacgacgcacc
aacccgaacgcctcccgcaagaaattcgtgaagcggaagtga
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