Clarias gariepinus (North African catfish): 128528338
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Entry
128528338 CDS
T10780
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128528338 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
128528338 (ighmbp2)
Ribosome biogenesis [BR:
cgar03009
]
Eukaryotic type
Other ribosome biogenesis factors
128528338 (ighmbp2)
Translation factors [BR:
cgar03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128528338 (ighmbp2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128528338
NCBI-ProteinID:
XP_053357124
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Position
7:complement(19743135..19756829)
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AA seq
1001 aa
AA seq
DB search
MEVESFVSRTLELLQEEREAEIEETRAWQRNLSLKNLQQKGVCLLKLQIGSQRTGMHGRL
LVSFEPRKSIGPSGLPSHSFGPGDIVGLYESEGCSQPNQLCSGVVTRVTQTSITVAFDET
HDGLNLESDALYNIMKLANDVTYKRLTHALNFLNGYRNGPAAHLISVLFGYSEPGMLSQQ
NALEWVNNGLDSSQQEAVLFALSQKDVAIIHGPPGTGKTTTVVEVILQAIKQGQKVLCCA
PSNVAVDNLVERLAKSKAKVLRLGHPARLLESIQKHSLDAVLAQSDNTNIIADVRKDIDK
AFSQIKKARDKGQKSSLRREIGELRKELRSREEMAITQILKRASVILATNTGASNDGPLK
HLPSEHFDLVVIDECAQALESSCWIALLKARKCILAGDYKQLPPTIKSQNAAAKGLSVSL
MERLIQKYGDSVVRMLTTQYRMNSAIMQWASEQMYQGKLSAHPSVEKHLLRDLAGVAHVE
ETSMPLLLVDTAGCGLNEMEDTDEQSKGNQGEVDIVALHVKALTKAGVQAKDIAVIAPYN
LQVDLLRQKLSHEYPDLEIKSVDGFQGREKEAVLLSLVRSNRKGVVGFLAEDRRINVAVT
RARRQLVVVCDSQTVRNHDFLRCLVDYMSEHGEVRTAFEYLEDLVPENYHRDFKEGQNNI
KAPSTKTKTTNQQGKRAESNHNKVSESKSKGNGQSKNSAHFSKNLKAGLPKPKADDQIET
QIKKEEIKEQLLTFMENQSQTELQFPSSLNSHERLLIHQLCEELKLQHVSKGTGKQRHIT
VSKPVAKPEESLEEESESTRPEIQIPEELTEKEAKRQPVKPTLDLKSLHLERMRREQEKR
EEKIQSKRLETEPKDGKGPSMKKNKGATKGKGKMKAGAVDIAAAATADDDFEALIDAVVK
AESVCGFIKCKASVLTLGQLCAYCNRQYCLSHHIPEVHGCGDKAKAQARMRISKEGVLYA
GSGQKDKSLDPNKKVYLQRKLDSKLKDMASQRKSKSKDKEH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaaagtttcgtttccaggacacttgagctcttgcaggaggagagagaagct
gagatagaagaaacgagggcatggcaaaggaatctctcactaaaaaatctacagcagaaa
ggagtctgcttgctgaaacttcagattggaagccagaggacaggaatgcatggcagactt
ctggtgtcatttgagccacggaaaagcatcggcccttcaggtcttcccagtcacagtttt
ggacctggtgacattgtgggtctttatgaatcggaaggatgcagccagcctaatcagctt
tgctcgggtgtagtgacccgtgtgacacagacatcaataacagttgcttttgatgaaacg
catgatggcctcaacctggaaagtgatgcgctatacaatattatgaagcttgcaaatgat
gtaacttataaacgattgactcatgctttaaactttttgaatgggtacagaaatggtcct
gctgcccatctaattagtgtcctttttgggtactctgagcctggaatgttgtcacagcag
aatgctttagagtgggtcaacaatggattagacagttctcagcaggaagctgttttgttt
gccctatcccagaaagacgttgctattatacatggaccaccaggaacggggaaaaccaca
acagtggttgaagttattctacaggctataaaacaaggccagaaggttttgtgctgtgca
ccatccaacgtggcagtggataatctggtggagcgcctggctaagagcaaggctaaggtc
ctgcgtctgggacatccagcacgtctgcttgagtcaatccagaaacattcactggatgca
gtgcttgcacagagcgacaacaccaacatcatcgcggatgtccggaaagacatagataaa
gcatttagtcagatcaagaaagcgcgcgacaaaggacaaaaaagcagcctaaggcgggaa
ataggagagttgcgaaaagaactgaggagcagggaggagatggccatcacccaaatcctg
aaaagggccagtgttattctagcaaccaacactggagctagcaatgatggcccactgaag
catttgccaagcgagcatttcgacctggtggtgatagacgagtgtgctcaggctctggag
agcagctgttggattgcactgctcaaagcacgcaagtgcattctggctggagactacaaa
cagctgccaccaacaattaaatctcagaatgcagctgctaaaggtctgtctgtgagttta
atggagcgtctgattcagaagtacggagactcagtagtgcgaatgctgaccacacagtac
cgtatgaacagtgccatcatgcagtgggcttcagagcagatgtatcagggcaaactgtcc
gcacatccttcggtggaaaaacatttactgagagacctggctggtgtagctcatgttgag
gagaccagcatgcctctgctcttagtggacactgccggctgtggtcttaatgaaatggag
gatacagatgagcagtcaaaaggcaatcagggtgaagttgacatagttgcacttcatgtg
aaagccttgactaaggctggagtgcaggccaaagacattgcagtcatcgcaccatataac
cttcaggtagatctgctaaggcagaagctctcccatgagtaccctgacctggaaatcaaa
tctgtggatggttttcaaggcagagaaaaagaggcagtgctgctgtccctggttagatcg
aatagaaaaggagtagttggatttcttgcagaggacagaaggatcaacgtggcagtaacg
cgtgccagacgccagcttgtagtggtgtgtgactcccagactgtccgaaaccatgatttt
ctcagatgcttggtcgactacatgtctgagcatggtgaggttcgcactgcctttgagtac
ctggaggacctggtgccagaaaactaccatcgtgattttaaagaaggacagaataacatt
aaagcaccttccaccaaaacaaagactacaaaccaacaaggcaagcgagccgagtccaac
cacaataaagtctctgagagtaaaagcaaaggaaatggtcaatcaaaaaatagtgcccat
ttcagcaaaaatctaaaagctggccttcccaaaccaaaagcagatgatcaaattgaaaca
caaattaaaaaagaagagataaaggagcagttgcttacttttatggagaaccagagtcag
acagagcttcagtttccatcttcccttaactcacatgaacgcctactgatccaccagctc
tgtgaagagttaaagctacagcatgtgagtaaaggaacgggcaaacagcgccatatcact
gtttccaaaccagtggcaaagccagaggaatcactcgaagaggaatcagagtccacaagg
ccagaaatccagattccagaggaactaacagaaaaagaagccaaaaggcaaccagtaaag
ccaaccctagacctgaaaagcttgcatttggagcgtatgcgcagagagcaagaaaaacgg
gaggaaaaaattcagagcaaaaggctggagacagagcctaaagatggcaaaggcccatca
atgaaaaagaacaaaggtgcaacaaaaggaaaggggaaaatgaaagcaggggctgtggac
attgctgcagctgctacagctgatgatgatttcgaagcactcatcgatgcagtggtgaaa
gcagaaagcgtgtgtggcttcataaagtgtaaagccagtgtgctcacactggggcagctg
tgtgcctactgtaacagacagtactgcctgagtcaccacatacctgaggtacacgggtgt
ggagacaaggcgaaggcacaggctcgaatgagaataagcaaagagggagtgctgtatgct
ggaagcgggcagaaagacaagtccctggatccaaacaaaaaagtgtacctgcaacgcaaa
ttagactctaaactcaaagacatggcatcccaaagaaaatccaaatcaaaggataaagaa
cattga
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