Clarias gariepinus (North African catfish): 128528343
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Entry
128528343 CDS
T10780
Symbol
pld3
Name
(RefSeq) 5'-3' exonuclease PLD3
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00564
Glycerophospholipid metabolism
cgar00565
Ether lipid metabolism
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
128528343 (pld3)
00565 Ether lipid metabolism
128528343 (pld3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128528343 (pld3)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
128528343 (pld3)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
128528343 (pld3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Tweety
Motif
Other DBs
NCBI-GeneID:
128528343
NCBI-ProteinID:
XP_053357131
LinkDB
All DBs
Position
7:27215929..27235914
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AA seq
481 aa
AA seq
DB search
MKSDIAYEKVADVESSKGESLMKPQKYSRWILIITCLIGVLLLMFSFQTLLIPSISTSDL
KCNPPMTHSCTDNCKLVLVESIPVGMEFNSSVGHPSIYQKWRSLLSEAKSSLDIASFYWT
LTNEDTSTHEPTANQGEEILRELVDLSGKISVRIAVNFHNKQQPSDIQQLITAGADVRYV
NMQYLTSGVLHTKFWVVDKKHIYIGSANMDWRSLTQVKELGTVVYDCKCLAEDLGKIFEA
YWFLGRSETVPAPWPSQFSTAFNKDTPMQLPINGTDSKVYLSSSPPSLCAEGRTSDLQAI
LSVISDAQQFVYIAVMNYLPTMEFSHKRYWADIDTELRRAAFERKVHVRLLISCWESTPE
VMFPFLRSLASVQDSKSSLDIQVKIFIVPSSPSQKKIPFARVNHNKYMVTDRTAYIGTSN
WSGDYFVNTAGSALVVNQTSSSESSESTVREQLQAVFERDWASSYSTPLNHDTNLKQICV
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgatattgcatatgaaaaggtggctgatgtggaatcaagtaaaggagagagt
cttatgaaacctcaaaagtattccaggtggattctgatcatcacctgtctcattggtgtg
ctgctcttgatgtttagcttccaaacactccttattccgtcaatctcaacatctgacctt
aagtgcaatcctcccatgacccactcctgcactgacaactgcaaactggttctggtggag
agcatcccagtgggaatggaattcaactcatctgttggccatccatccatctatcaaaaa
tggcgaagtctcttatcagaggcaaagagcagtctggacattgcctcgttttattggacc
ctcactaacgaggatacgagcacacacgagcccacggctaatcagggtgaggagatcttg
cgggaacttgttgatctttctggcaaaatctctgtacgcatcgctgtaaatttccacaac
aaacagcaaccgagtgacatccagcagctcattactgctggtgctgacgtgagatatgta
aacatgcaatatttaacatctggtgtgctgcacactaaattctgggtggtcgataagaag
cacatttacatcggtagtgccaacatggactggagatccttaactcaggtgaaggagctc
ggtactgtggtttatgactgcaagtgcctcgctgaagacctcgggaaaatattcgaagcc
tattggttccttggcaggagcgagacagtacctgctccctggcccagtcaattttctaca
gcctttaacaaagacacaccaatgcaactgccaatcaatgggacagactctaaagtttac
ctgtcgagttctcctccatccttgtgtgctgagggcagaacttccgatcttcaggccatt
ttaagtgtcattagtgacgcacagcagtttgtttacattgctgtgatgaactatctgccc
actatggagttctcacacaaaagatactgggctgatatagacactgagctgaggcgtgca
gccttcgagagaaaggttcatgtgcgtttgctgatcagttgctgggaaagcacccctgaa
gtcatgttcccatttttacgctcgctagcttcggtacaggattcaaagagtagtctggac
attcaggtgaaaatcttcattgttcccagcagtccaagtcaaaagaaaatcccctttgct
cgagtgaaccataacaagtacatggtgacagacagaactgcctatataggaacttcaaac
tggtccggtgattactttgtgaacacagcgggctcagcgttggtggtgaatcagacctca
tcctcagaatcctcagaatccacagtgagagaacagctgcaggctgtgtttgaaagagat
tgggcttcttcctacagcactccgcttaaccatgacaccaacctgaaacagatatgcgtt
acataa
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