Clarias gariepinus (North African catfish): 128528346
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Entry
128528346 CDS
T10780
Symbol
prpf18
Name
(RefSeq) pre-mRNA-splicing factor 18 isoform X1
KO
K12817
pre-mRNA-splicing factor 18
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128528346 (prpf18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128528346 (prpf18)
Spliceosome [BR:
cgar03041
]
Complex C
Other components
Step II factors
128528346 (prpf18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
DUF2521
Motif
Other DBs
NCBI-GeneID:
128528346
NCBI-ProteinID:
XP_053357134
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All DBs
Position
7:11893408..11902103
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AA seq
343 aa
AA seq
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MDILKAEIARKRKLLEEKELVDNTKKYFKRAELAKKEEEEYFKRCGYNEKKQQKEETTPS
TSSNPVLELELTEEKLPMTLSRQEVIRRLRERGEPVRLFGETDYDAFQRLRKIEILAPEV
NKGLRNDLKAAMDKIDQQYLNEIVGGQEAGDPDAQDDLKVHEENTTIEELEALGESLGTG
NDMKDMDIIEKVMRFLLGVWAKDLNSREYHIKRSVQGKLASATQKQTESYLKPLFRKLSK
KTLSPDIKESITDIIKFMLQREYVKANDAYLQMAIGNAPWPIGVTMVGIHARTGREKIFS
KHVAHVLNDETQRKYIQGLKRLMTICQKHFSTDPSKCVEYNAL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacattctgaaagcggaaatcgcgcggaagcggaagttattggaggagaaagagctc
gtggataacacaaagaagtacttcaagcgggctgaactcgccaaaaaggaggaagaagag
tactttaaacgatgtggatacaacgagaagaagcagcagaaagaggaaaccacgccgtcc
acctcatccaaccccgtcttagagctggagctcactgaggagaagttacccatgaccctc
tctcgacaggaagtgatccggcgtctgagggagcgcggagagccggtgcgtcttttcgga
gagactgactacgatgcctttcagaggctccgcaagatcgagatcctcgcaccggaagtg
aacaagggtctgaggaacgatctgaaggcggcgatggataagatcgatcagcagtatttg
aacgagatcgtaggagggcaggaggctggagatccagacgcacaggacgaccttaaagtg
catgaagagaacaccactatcgaggagctggaggcactgggtgaatctctaggcaccgga
aacgacatgaaagacatggacattatagaaaaagtgatgcggttcttgctgggtgtttgg
gctaaagacctgaacagcagagagtaccacattaagcggagcgtacagggaaagctggcc
agcgcgacgcagaaacagaccgagtcttatctaaagcctctgttcagaaaactgagcaag
aagactttatctccagatattaaagaatccatcacagacatcattaagttcatgctgcag
agggaatatgtaaaggcgaatgatgcgtacctgcagatggcgatagggaacgctccgtgg
cctatcggtgtgaccatggtgggaatccatgcgcgtactggccgagagaaaatcttctcc
aaacacgtcgctcacgtcctcaatgacgaaacccagcggaaatacattcagggtctgaag
aggttaatgacaatctgtcagaagcatttttccacagatccttcgaaatgtgtggaatac
aacgctctgtga
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