Clarias gariepinus (North African catfish): 128528368
Help
Entry
128528368 CDS
T10780
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF
KO
K23195
transcriptional repressor CTCF
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128528368 (ctcf)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128528368 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128528368
NCBI-ProteinID:
XP_053357167
LinkDB
All DBs
Position
7:21009235..21016664
Genome browser
AA seq
804 aa
AA seq
DB search
MEGGQTDAVVDETGDAFKAKDCKTYQRRREDEEVEAELLQAAGLEAVEQPVAEGEVTGTV
VDAQQQLVEGVVSVNSGVEMMVMDSLDPALLQMKTEVMEGTMTTSVGVAGAAHEATVTTV
DDTQIITLQVVNMEEQQLGLGELQLVQVPVSAVPVTATTVEELQGTLVDATAMPKDGEPV
ICHTLPLPEGFQVVKVGANGEVETVEQDELHAHEEQSMPQPEDEEIPEPQNDDPTWAKDP
DYTPPVKKTKKTKKSKLRYNTEGEKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKP
TKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLN
THTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHT
GERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENV
AKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGRKCRYCEAVFHERYALIQHQKSHKNEKR
FKCDQCDYACRQERHMVMHKRTHTGEKPYSCSHCEKTFRQKQLLDMHFRRYHDPNFVPTS
FVCTKCGKTFTRRNTMARHAENCSGMEGGDGENGTPTKRGRGGRKRKMRSRKDDDDSDEH
GEPDLDDIDEEDEDEEDVLDDVEMEVEQAPPTIPVPAPAEPPVKRKRGRPPKNPPKASPA
KNTAIAPTATAIIQVEDEGTGAIENIIVKKEQDGMDSSVVASAEPLVEEIEASEGGMEAE
QLSVPEAAPNGDLTPEMILSMMDR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggacagactgatgccgtagtggacgagacgggggatgctttcaaagccaag
gattgtaagacatatcaacggcgacgtgaggacgaagaagttgaagccgagctgctacag
gcggctggtctagaggcagtagagcaacccgtagccgagggtgaggtgacgggtactgtg
gtcgatgcacagcagcaactggttgaaggtgtggtgagcgtaaatagtggtgtcgaaatg
atggtcatggactcgctggacccagccctattgcaaatgaagacagaagtgatggagggt
accatgaccactagtgtgggtgtagctggggctgcacatgaggccacagtcaccacagtg
gatgacacacagatcattaccctacaggtggtcaatatggaggaacaacaattgggcctg
ggtgaactgcaactcgttcaggtgcctgtttcagctgtgcctgttactgccaccactgta
gaagagctgcagggaacactggtggatgctactgccatgcccaaagatggagaacctgtt
atctgtcacacgctgcctctcccagagggcttccaggttgtaaaagtaggtgccaacgga
gaagtagagactgtagagcaagatgagctccatgctcatgaggagcagtctatgccgcaa
ccagaagacgaggagattcctgaaccccagaatgatgaccccacttgggccaaggacccc
gactacacgcctcctgtcaaaaagaccaaaaagacaaagaaaagcaagctgcgctacaac
actgaaggcgagaaagatatggatgtgtctgtttacgactttgaagaggagcagcaagaa
ggtctgctctctgaggttaatgcagagaaggttgtgggcaacatgaaacctccaaagcca
accaaaatcaagaagaagggtgtgaagaagacattccagtgcgagttgtgtagctacacc
tgcccaagacgctccaaccttgatcgtcacatgaagagtcacacagatgagaggccgcac
aaatgccacttgtgtggacgtgctttcaggacagtcaccctgctgaggaaccatctcaac
acacacacaggcacaagaccccacaaatgtacagattgtgatatggcttttgtgactagc
ggtgagcttgtgcgacaccgtcgctataaacacacccatgagaaacccttcaagtgttcc
atgtgtgactatgctagtgtggaggtcagcaagctgaagagacacattcgctctcatact
ggagagcgtccattccagtgcagcctttgcagctatgccagcagagacacctacaagctt
aagagacacatgagaacccactcaggggagaagccgtatgagtgctacatctgtcatgca
cgttttacccagagcggcactatgaagatgcacattctgcagaagcatactgagaatgtg
gccaagtttcactgcccccactgtgacactgtcattgctcgaaaaagtgatttgggtgtg
catctgcgtaagcagcattcctacattgagcaaggcaggaagtgccgttactgtgaggcg
gtgtttcatgagcgctacgccctcatccagcaccagaagtcccataagaacgagaaacgg
ttcaagtgtgaccagtgtgactatgcttgccgacaggagcgccacatggtgatgcataag
cgcacacacactggggaaaagccatattcctgcagccactgtgagaaaaccttcagacag
aaacaacttctggacatgcattttcgtcgctaccatgaccccaactttgtgcccacttcc
tttgtgtgcaccaagtgtggcaagaccttcacacgcaggaacaccatggcgaggcatgct
gagaactgttctggaatggaaggtggtgatggagaaaatggtactccaaccaagagaggc
cgtggtggcagaaagagaaagatgcgctccaggaaggatgatgacgacagtgatgaacat
ggagagcctgatttggatgacattgatgaggaggatgaggatgaagaggatgttcttgat
gatgtggagatggaggtggaacaagctccaccaaccattcctgtccctgcacctgctgag
ccacctgtcaagaggaaacgcggccgacctcccaagaacccccccaaagcttcccctgct
aagaacacagccattgcacccactgctactgccattatccaagtggaggatgaggggaca
ggagccattgagaacatcatagtcaagaaggagcaggatggcatggattcttcagtggtg
gcatcagcagagcctctggtggaggagattgaggcctctgagggaggaatggaggctgaa
caactctccgtccctgaggccgcacctaatggggacctcacccctgagatgatcctcagc
atgatggaccggtga
DBGET
integrated database retrieval system
