Clarias gariepinus (North African catfish): 128528370
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Entry
128528370 CDS
T10780
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128528370 (trip12)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
HECT type E3
128528370 (trip12)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128528370
NCBI-ProteinID:
XP_053357170
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Position
7:26855148..26906707
Genome browser
AA seq
2073 aa
AA seq
DB search
MSIRINHTAGGSLRRSQRNTLATRLQSEQTKQKTNSPPDSRRSYTKASKSPPTPAAGSSR
GHAPRRNSLSLSSLNHSVSDPDSEAAGSSGQHESREVSNNRALKRSSAPDHNNTSYSPSP
AKRPKAPAPESSEQSEPANPTADSAPESPPTGRSKKRRLASEPPTSRTLNRKSSTCPATS
SSHKRKKADAPFSSSSSSSFSSSSSVLSGSSSEQASRSSKPSKLASKSAASAKSVTDSAS
SSSASSSSFTSSSSSSSSVVVAGASGCGAPPSQGARLKQGKDQSKSRRSRSASSPSPRRS
SRDKEHSKSSTAASKFDWTSRFSPRVNLPKPRLTLPGSSKPETPSGSSKPGPSGLQAKLA
SLRKSTKKRSESPPAELPSFRRSTRQKTTGSCASTSRRGSGLGKRGAAETRRQDKMAEND
NNQDGANSSRTEETPQGASASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLF
GPRMSQLFHRTIGTGASSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPV
KSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDV
AEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFH
FVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASRDLLTNIQQLLVV
TPPVLSSGMFIMVVRMFSLMCSNCPNLAVQLMKQNIAETLRFLLCGASNGSCQEQIDLVP
RSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAHTTEAAVWQWRDDRGLWHPYNRI
DSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLINPNTGHV
EVRGEDARAELMREEADLARCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFSDSE
LLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKN
LAESESFLPSPPKACTSGITAATTTITTATSPAASSVTPDLGSPSFHNNMEDSLDLSPQG
RLSDVLKRKRLPRRVPRRPKYSPPRDDDKVDNQAKSPTTTASPKSSFLASLNPKTWGKLG
AQNNSTNSEPSRTAGVSGLARTANKDSVANNRDKIKAWIKEQASKFVERYFNSENVDGSN
PALNVLQRLCTATEQLSLQVDGGVECLVEICSIVSDSDVSSFEIQHSGLVKQLLLYLTSN
SERDVVSRDERIKRFLHIFCGSPVPGQEPLFRLEPTENGPLLALVHKMNSCLSQMEQFPV
KVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIE
RYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIADHLLPYNMTV
YQAVRQFSLQPEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGYKDSVGGKRGRA
QTAPTKTSPRNAKKQDELWHDGVCPSVSNPLESYLISDPPEGITFDDPSLEVILLLRVLH
SISRYWFYLYENAVCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPPWLTELGKTCP
FFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELL
KQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGDEVTLAN
PKGSQEGTKYMFNSRGLFAVPFGRSTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLG
LPFYKWMLRNETSISSHDLVNIDPGVAKSIQHLEDIIRQKKRLEQDKSYTRETLQHALES
LNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIHNLEEYLRLVVYWTLNEGVSRQFE
SFREGFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFL
FEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTC
VNYLKLPDYSSIEIMREKLLMAAREGQQSFHLS
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcaggattaatcacactgcaggggggtcactgcgccgatcacagaggaacaca
ctcgccaccaggttgcagtcagaacaaaccaaacaaaaaacaaattcccctcctgacagt
agacggtcatatactaaagcttccaaatccccacccacacctgcagctggctcctcgcgt
ggccacgcccccagaagaaacagtctttctctgtcttcgcttaatcactctgtatctgac
ccggattcggaggcagctggtagctccggccaacacgagtcacgtgaagtcagcaacaac
cgcgccctcaaacgtagctctgcgcctgaccacaacaacacatcctactcgcccagcccg
gctaagcggcccaaagctccagcccccgagagctccgagcagtcggaacctgctaaccct
actgctgactccgcccccgagtccccgcccacgggcaggtccaaaaagcgacgcctggca
tccgaacctccaacaagcaggacactaaacaggaagagcagcacgtgccctgccaccagc
tcctcccacaaacgtaaaaaggcagacgccccatttagctcttcttcttcctcctcgttt
tcttcctcttcctcagttttatccggctcgagcagcgagcaggccagccgctcatccaaa
ccctccaaactggcgtccaaatcggccgcctcggccaaatctgtgaccgactccgcttct
tcctcttccgcttcgtcttcatccttcacttcctcttcctcctcctcctcttctgtggtg
gttgcgggtgccagcggctgtggtgccccgccctcacagggcgcccggctcaagcagggt
aaagatcagagcaagtcgaggcggtctcgttccgcttcttcaccctctcctcgccgcagc
agtcgtgacaaagagcacagcaaatccagcactgctgcgtctaaattcgattggacaagc
cgcttcagtcccagagtgaacttaccgaaacctagactcactctgcctggatcctccaaa
cccgaaacgccctcggggtccagcaaacccggaccgagtggactgcaggccaaacttgcc
agtctgagaaagtccactaaaaagcgcagtgagtctcccccagcagaactccccagcttt
aggaggagcacccgacaaaagaccacgggctcctgcgccagcaccagtcggcgaggttca
ggtttagggaagcgtggtgcagctgaaactcgccgacaggacaaaatggccgaaaacgac
aacaatcaggacggagccaattcatcacgcacggaggagacgccgcagggagcttcagcc
tccagttcagtggctggtgctgtgggaatgaccacatctggagagagtgaatcagatgac
tcagaaatgggccgattgcaagctctactggaggctcgtggtcttccccctcaccttttt
ggacctcgcatgtcccagctgttccatcgtaccatcggcactggagcaagttcaaaggct
cagcagctgctgcagggtctacaggcaacgggcgacgagtctcagcagctgcaggcagcc
atagaaatgtgccagctgttggtgatggggaacgaggagaccctgggtggatttcctgtg
aagagtgtcgtacccgctttgatcacactgttacaaatggagcataacttcgatattatg
aatcatgcgtctcgagctctaacctacatgatggaggctctgcctcgctcctctgctgta
gtcgtagatgccattcctgtcttcctggaaaagcttcaggtgatccagtttatagatgtg
gccgagcaggctctcaccgcgctggagatgctctcacggagacacagcaaggccatcctg
caggccggcgggttggccgactgtctgctgtatctggagtttttcagtattaacgctcag
aggaatgcattagccattgccgctaactgctgccagagcatcacacctgacgagtttcac
tttgtagccgactctctgcctctactcactcagagactcacacaccaggataaaaaatca
gtggagagcacgtgcctctgtttcgcccggcttgtggacaactttcagcatgaagagaat
ttgttgcagcaggtggcgtcacgcgatcttctaacgaacatccagcagcttctggtggtg
acgccgccggtgctgagttcaggcatgttcatcatggtggtgcgcatgttctcactcatg
tgttccaactgccccaacctcgctgtgcagctgatgaaacaaaatatcgcggagacactg
cgtttcttgctttgtggagcttctaatggaagctgtcaggagcaaatcgacctcgttccc
agaagcccccaggaactctacgagctcacttcacttatctgtgagctgatgccatgcctc
ccaagagagggcatttttgctgtagacgccatgttgaagaaaggtagtgcgcacactaca
gaggccgcagtgtggcagtggagggacgacagaggcctgtggcatccatacaaccgcatc
gacagtcgtatcattgagacggcccatcagaatggcgaggacgaaatcagcctctcgaca
ctcggccgagtttataccatcgacttcaactctatgcagcagatcaacgaggacacagga
acggcacggggaattcagaggaaacccaaccccctgatcaaccccaacactggtcatgtg
gaggtgcgtggcgaggatgcccgtgccgagctgatgcgggaggaggcggacctggcgcgc
tgctttatcaagactctgtttggtgtgctttatgaggtgtacagctcctcagccggccct
gccgtcagacacaagtgcctcagagccatcctgcgcattatctacttctccgactctgag
ctgctcaaggatgtgctgcgcaaccatgctgtctccagtcacatagcctccatgctgtcc
agtcaggacctgaagattgtggtcggctctttgcaaatggcggagatcctcatgcagaaa
ctccctgatgtgtttagtgtctacttcaggagagaaggtgtgatgcaccaggtgaagaac
ctggctgagagtgagtcattcctccccagtccgcccaaggcatgcacgagcggcatcact
gcggcaaccaccacgatcaccacagcaacctcacccgctgcctccagtgtcacgccggat
ttgggctcaccgagtttccataacaacatggaggactcgctggacctcagcccacagggt
cgtctgagtgacgttctaaagaggaagcgccttcctcgcagagtaccacggcgtcccaaa
tattctccacccagagatgatgacaaagtggacaatcaggccaagagtcccaccaccact
gcgtctcccaaatcatccttcctggcaagtcttaaccccaaaacctggggaaaactcggt
gctcagaacaatagcactaactctgagccgtcacgcacagccggggtcagtggcctcgca
cgcacggctaacaaagactccgtcgcaaataacagggacaaaattaaggcatggataaag
gaacaggccagtaagtttgtggaacgatacttcaattcagagaatgtggacggcagcaac
ccagcattgaacgttctgcagagactgtgtactgctacagagcagctcagcctgcaggtg
gatggcggggtggagtgtttggttgagatctgcagcatcgtttccgattccgacgtgtcc
tcattcgagattcagcacagtggcctggtgaagcagttgctgctctatttaacctccaac
agtgagagagacgttgtcagcagggacgagaggatcaaaagattcctgcacattttctgt
ggcagtccagttccagggcaggagccactattccggttggagccaacagagaatgggccg
ctgttggcgcttgtgcacaagatgaacagttgtctgagtcagatggagcagtttcctgtt
aaagtgcacgactttcccagtggtaatggcaacggcagcagaggttctcaagcactgaaa
ttcttcaacacacaccagctgaagtgccagctgcagagacacccagactgcaccaacgtt
aaacagtggaagggcggtcctgttaaaatcgaccctctggcattagtacaggctattgag
agataccttgttgtcagaggatatggacgaatcagggaggaggatgaagacagtgacgat
gacggatcagatgatgaaattgatgagtcacttgcagctcagttcttgaattcggggagt
gtgcgtcaccggctacagttttacattgctgatcacctgctgccctacaacatgaccgtt
taccaggcggtgcgtcagttcagcctgcaaccagaggaggagcgggagagcactgacgat
gaggccaaccctctcggtcgtgctggcatctggaccaaaacacacacgatatggtataaa
ccggtcagagaggatgaggatggctataaggactccgtaggaggcaaaaggggtcgagca
caaacggctcccactaaaacctcaccacgtaatgctaagaaacaggacgagctgtggcat
gatggtgtgtgtccgagtgtcagtaatccgttggagtcgtacctcatatccgatcctcca
gagggcattacatttgatgacccctcactggaggtcattctgctgttgagggttctgcac
tcgatcagcagatactggttctacctctacgagaatgctgtgtgtaaggagatcattccc
actagtgagttcatcaacagtaaactgacagcaaaagcaaacagacagttgcaggatcca
cttgtgatcatgactggaaacatcccaccctggctcactgagcttggaaagacgtgtccg
ttctttttcccgttcgacacgaggcagatgttgttctacgtcactgcgtttgatcgtgac
cgggccatgcagcgtctgctcgacaccaacccggaaatcaaccagtcagattcacaggac
agccgtgtagcacctcgtctagatagaaaaaagcggacgataaacagagatgagctgttg
aagcaggctgagtcagtgatgcaggatctgggaagttccagagctatgcttgagattcag
tatgagaatgaggtgggaacaggtcttggtccaaccttggagttttacgctcttgtatct
caggagctacagagagctgatctgggtttatggcgaggagacgaggtcactcttgctaac
cctaaagggagtcaggagggaaccaagtacatgttcaactcaaggggcctttttgctgtg
ccttttggccgcagcaccaagccagctcacatcgccaagatcaagatgaaattccgcttt
ctgggaaaactcatggctaaagccatcatggacttcagactgctggatcttcccctgggc
ttgcccttttacaagtggatgttgagaaacgagacgtcaattagctctcacgatttggtg
aacatcgaccccggtgtggccaaatccattcagcacctagaggacatcatcaggcagaag
aagagactagagcaggataagtcctatacgagggaaacactacagcacgctctggagagt
ttaaatatgaacggctgttcagtggaggacttggggctagacttcacactgccaggattc
ccgaacatcgaactgaaaaagggaggcaaagacgtccctgtcaccatacacaacctggag
gagtacctgaggttggtagtctactggaccctaaatgagggtgtatcccggcagttcgag
tcatttagggaagggttcgagtctgttttccctctccaccacttacagtacttttaccca
gaagagcttgaccagttgttgtgtggcagcaaatcagagacgtgggacgtcaaaactcta
atggaatgctgtagaccggaccacgggtatactcatgacagccgggcagtgcgattcctc
tttgaggtgttgagtagctttgatgcagagcagcagagactcttcttgcagtttgtgacc
gggagtccgagacttccagtaggaggtttccggagtttgaatcctcccctgacaattgtg
cgcaagacgttcgagtcgacggagaacccggacgacttcctgccgtctgtgatgacgtgt
gtaaactacctgaagcttccggattattccagcatcgagatcatgagggaaaaactgtta
atggcggcacgggaaggccagcagtcttttcacctgtcctga
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integrated database retrieval system
