Clarias gariepinus (North African catfish): 128528546
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Entry
128528546 CDS
T10780
Symbol
fignl1
Name
(RefSeq) fidgetin-like protein 1
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128528546 (fignl1)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128528546 (fignl1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128528546 (fignl1)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128528546 (fignl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
AAA_16
TIP49
IstB_IS21
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
128528546
NCBI-ProteinID:
XP_053357404
LinkDB
All DBs
Position
8:20189006..20191976
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AA seq
666 aa
AA seq
DB search
MSSVHLDEWQRRSFDISSGTCTPEQTADAYRAHILAIQYAWANAELSPHGAASLFRTYTE
RYAAVLDSDDQHTGLNNYADSALHLARNQRNHSDKWESSLTVENVFSLPCVQKMMQSGVD
DSSVSVDPADADVIVGGEVGQSCGKGMIVSNAAVGCKPEHPSCWPVRHSSAGVEKTPGNM
ATGAADTTKSKETSLPSAPNAPALPTGVTPLLAHNSRNSPTNPGSFPCSSFASTSVTGAN
NHNSVFYSSTNPSKRKNVYSSGTESSRSSFLPQGGHEGGGSGRRREELSGTIFKTAREQL
IVDQQKKHSHQAQRGSSAPTGTIIKKSLGANRSRGAFSKFVSPIPRQEEDSSSRDAPTQD
TQPVDERLKNFEPKIIELIMSEIMDHGPPVAWEDIAGLEFAKATIKEIVVWPMLRPDIFT
GLRGPPKGILLFGPPGTGKTLIGKCIACQSGATFFSISASSLTSKWVGEGEKMVRALFAI
ARCHQPAVIFIDEIDSLLSQRTDGEHDSSRRIKTEFLVQLDGAATSSEDRILVVGATNRP
QEIDEAARRRLAKRLYIPLPEAAARQQIVSSLMSREKSQLRVDELEKVVSSTEGFSGADM
TQLCREAALGPIRSIQLSDIATITPEQVRPILYCDFQEALKTVRPSVSTKDLELYEDWNK
TFGCGR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgtacacctggacgagtggcagaggaggtcctttgacatttcgtctggcaca
tgtacacccgaacagacggccgatgcttaccgggcacacattctggccattcagtatgca
tgggcgaatgccgagctctctccacacggagctgccagcctgttcaggacctacaccgag
cgctatgctgcagtcctggactcagatgaccagcacacaggactgaataactacgccgac
agcgccctgcacttggcccgcaatcagagaaaccacagcgacaaatgggagtcgtcgttg
acagtcgaaaatgtgttcagcctgccatgcgtgcagaagatgatgcagagtggggtggac
gacagcagcgtctctgtggatccagcagatgctgacgttattgttggtggagaagtcggt
cagagttgtggcaaaggtatgatagtgtccaatgctgctgttggatgcaaacctgagcat
ccttcatgctggcctgtgcgtcacagcagtgctggggttgagaaaacaccagggaacatg
gccactggtgcagcagacacgaccaaaagtaaagaaaccagtctaccttcagcccctaat
gcccctgcactcccaacaggggtaactccactcttggctcataactctcgtaattcccct
accaaccctggctcttttccatgttcaagttttgctagcacaagtgtgaccggcgcaaac
aatcacaattctgtgttctactcctccacaaatccctctaagaggaagaatgtctacagt
tcaggaactgaaagcagcagaagctcattcctgccacaaggaggtcatgaaggtggaggt
agtggacggagaagagaagagctttctggcactatctttaaaacggcacgagagcagctt
attgttgaccagcagaaaaaacactcccatcaggcacagcggggttcatccgctcctact
ggtacaataattaaaaaatctttgggggctaacaggtcaaggggggctttttccaagttt
gtgtcaccaataccaaggcaggaggaagacagtagcagcagggatgccccaacacaagac
actcagcctgttgatgagcgacttaagaactttgaacctaaaattattgaattgattatg
agtgaaattatggaccatggcccacctgtggcctgggaggatattgccggccttgagttt
gccaaagcaaccattaaggaaattgtagtttggcccatgctcaggccagacattttcaca
ggtctcagaggtccacctaagggaattctcttgtttggccccccaggtactggaaagacg
ctcatagggaaatgcatagcctgtcagtctggtgctacgtttttcagcattagtgcatca
tcactcacctctaagtgggtgggagaaggggaaaagatggttcgagctctgtttgccatc
gcccggtgccatcagccagctgtaatttttatagatgagattgactccctgctttctcag
cgcacagatggagaacatgactcatctcgccggattaagactgaatttcttgttcagctt
gatggagctgcaacttcctctgaagaccgaatattggtggttggggccaccaatcggcct
caggagatcgatgaagcggctcggcgccgcctggccaagcgactctacattccccttcca
gaggctgccgcacgtcagcagatagtgagcagcctaatgtcgcgggagaagagccagttg
agagtggatgagcttgagaaggtggtgtcgagcacagagggtttctctggggctgatatg
acgcagttgtgccgtgaagcagcactcggaccgatccgcagcatccagctaagtgacatc
gccaccattacacccgagcaggtgcgacccatactgtactgtgactttcaggaggcactt
aagactgtacggcccagtgtgtctaccaaagatctggagctctatgaggactggaacaag
acttttggctgtggtagataa
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