Clarias gariepinus (North African catfish): 128528563
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Entry
128528563 CDS
T10780
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128528563 (lingo2b)
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
128528563 (lingo2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
Ig_2
LRR_RPS2
V-set
LRR_9
LRRNT
Ig_6
C2-set_2
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
128528563
NCBI-ProteinID:
XP_053357447
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All DBs
Position
8:complement(22629555..22651227)
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AA seq
607 aa
AA seq
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MLLSLFSCAVGFSLLPLLLFPYPAQACPARCECSVPTRSVSCHRKRLAQVPEGIPIETRA
LDLSKNRLRIVTPQNFSGLLLLEELDLSTNLLSSVEPGSFRAQPRLRTLRLRNNQLTLLP
RGALAGLSELTLLDISQNRLVILLDYGFEDQRRLRVLELADNELVFVAPRAFSGLPALRS
LTLQRCNLSAVPSHALAHLHSLTSLRLRQLDIAELLPHSFKGLGRLRHLEVDHWPALEVV
PSLALQGLNLSTLFITHTNLTVVPVLSHLSYLTHVNLSYSSLKVLPAGWLRGLDRLEVLH
VRKAQLVRVEAQAFQGALSLRLLDLSYNRLTTLERATLPATVALQNLLIGQNSLVCDCRL
RWLLQRTLPLKFGEVQPQCTTPAALAGKYFSDIVEPLLSRYVICTKPRVIAMSTQPAQAE
EGQKAWLYCTADGAPPPSVSWLTPHRRHITTKSTGRMVVHGNGSLEFRVVELQDSGMYVC
VASNPAGNSTLSITLAVKSLGLRDGALYANLSFTFDHDYNSSLINGTEHYTIRMVLDFTT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGANSDLTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctctttgttctcctgtgctgtgggcttctccctcctaccgctcctcctgttc
ccgtaccctgcccaggcttgccctgcacgttgtgagtgttctgtgcccacacgctctgtc
tcgtgccaccgcaagcggctggcccaggtgccagagggcatccccatcgagacacgagca
ctggatctcagcaaaaaccgtctacgcattgtcacaccacagaatttctctggccttctg
ttgctagaggagcttgacctgagcaccaacctcttgtcatctgtggagcccgggagtttc
cgtgcccagccacgtttacgaacactgcgtctgcgaaacaatcaactgactttgttgcct
cgtggtgcacttgccggcctgagtgagctcactctgctggacatcagccagaaccggctg
gttatcctgcttgattacggctttgaggaccagcggcgtctgcgtgtccttgagcttgct
gacaacgagctggtttttgttgcaccccgtgccttcagtggcttgcctgcattgcgctcg
ctgacactacagcgttgtaacctgagtgctgtgcccagtcacgcactggcacatctgcac
agcctaaccagtcttcgccttagacagctggacattgcagaactgctaccacacagcttt
aagggcctgggccgactgcgtcatcttgaggtggatcactggccagcactggaagtcgtg
ccctctctagctctgcagggactgaatcttagcacgctcttcatcacccacacaaacctt
acagttgtgccagtactgagccacctgtcctacttgactcatgtgaacctgtcatatagc
agtctgaaggtgctgccagctggctggctgcgtggtctggaccggctggaagtgctgcat
gtacgaaaggctcagttggtgcgtgtggaagcccaggcattccaaggagccctgtcactt
cgtctgcttgacctctcttacaatcgcctgaccacactggaaagagctactctgccagca
actgtggccctgcaaaacctcctgattggccagaactcattagtgtgtgactgccgtctc
cgctggctacttcaaaggacactaccgctaaaatttggggaggtgcaacctcagtgcaca
actcccgctgctctggctgggaaatatttcagtgatatagttgagccactgctctcccgc
tatgtcatatgcaccaaacctagggttattgccatgtcaacacaaccagcccaagcagaa
gaaggacaaaaggcatggttgtactgtacagcagatggagctccgcccccatctgtctcc
tggctgacaccccacagaagacacatcaccaccaagagcacaggccgcatggttgtccat
ggcaatggttctctggagtttcgggtagtggagctgcaggatagcggcatgtatgtttgc
gtggcctccaatccagcaggcaattccaccttgtccataacgctagctgtcaaaagcctg
ggccttagggatggggctctctatgccaaccttagcttcacctttgatcatgattacaat
agctccctgatcaatggcacagagcattacacaatcaggatggtactggacttcaccacc
attcttgtgtctacagcaatgggctgcctcagcttcctgggcgtggtccttttctgtttt
ctgcttctgttcgcttggagccgaggcaaaggcaagcacagaggaagtgtggacattcag
tatgttccacgcaagaggaaaggagccaacagtgatctaactgagaccagcggccccaga
cgtgtcaacatgaagatgatttga
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