Clarias gariepinus (North African catfish): 128528579
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Entry
128528579 CDS
T10780
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04517
IgSF CAM signaling
cgar04518
Integrin signaling
cgar04519
Cadherin signaling
cgar04520
Adherens junction
cgar04530
Tight junction
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128528579 (actn1)
04518 Integrin signaling
128528579 (actn1)
04519 Cadherin signaling
128528579 (actn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128528579 (actn1)
04520 Adherens junction
128528579 (actn1)
04530 Tight junction
128528579 (actn1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
128528579 (actn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128528579 (actn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128528579 (actn1)
04147 Exosome [BR:
cgar04147
]
128528579 (actn1)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128528579 (actn1)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128528579 (actn1)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128528579 (actn1)
Exosomal proteins of colorectal cancer cells
128528579 (actn1)
Exosomal proteins of bladder cancer cells
128528579 (actn1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
Motif
Other DBs
NCBI-GeneID:
128528579
NCBI-ProteinID:
XP_053357471
LinkDB
All DBs
Position
8:38087149..38122112
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AA seq
898 aa
AA seq
DB search
MDHHHHPHPQCDGETNDYMQQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIEN
IEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALSFITSKGVKLVSIGAEE
IVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWK
DGLGFCALIHRHRPELIDYGKLRKDDPMTNLNTAFEVAEKYLDIPKMLDAEDIVGTARPD
EKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLATDLLEWIRRTI
PWLENRVPESTMAAMQQKLEDFRGYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFM
PSEGKMVSDVSNAWGSLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTEGKE
AMLNQKDYETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELEYYDSPSVNA
RCQKICDQWDALGVLTQKRSEALQKTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQD
TFIVHTIEEIQGLSTAHEQFKATLPDADKEKQAILGIHSEIAKIVQTYHVNMMGTNPYTS
ITPQEINTKWERVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQTKMQEIG
RISIELHGTLEDQLNNLRQYEKNIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIR
VGWEQLLTTIARTINEIENQILTRDAKGISQEQLSEFRASFNHFDRDHSGTLGAEEFRAC
LISLGFDIGNDAQGEVEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFK
VLAGDKNYILAEELRRELPPDQAEYCISRMAPYRGSDAVPGALDYMSFSTALYGESDL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggaccatcatcatcatcctcatcctcagtgtgacggagagaccaacgactacatgcag
caggaggacgactgggacagggacctgctgctggaccccgcctgggagaaacagcagagg
aagacgttcacggcatggtgtaactcccacctaaggaaagcagggactcagatcgagaac
attgaggaggacttcagagatggactcaaactcatgctgctcctggaggtcatctcagga
gagcgtctagcgaagccggaacgagggaagatgagggtgcacaagatttcaaatgtgaac
aaagctctgagtttcatcaccagtaaaggagttaaactggtgtcaattggagcagaggag
attgttgatggaaacgctaagatgactctgggaatgatctggaccatcatcctccgcttc
gccattcaggacatctcagtggaggagacttcagccaaagaggggctgctgctgtggtgc
cagaggaaaaccgctccgtacaagaacgtcaacatccagaacttccacatcagctggaag
gacggactgggattctgcgctcttatccatcgacatcgtccggagctcatagattacggc
aaactgcgtaaggatgaccctatgaccaacctgaacactgcttttgaagtggcagagaaa
tacctcgacatccccaaaatgcttgacgccgaggatatcgttggtacggcccgcccggat
gaaaaggccatcatgacctacgtttctagcttctaccacgccttctctggggcacagaag
gcggagacggcggccaatcgcatatgtaaagttctcgctgtcaatcaggagaacgagcag
ctgatggaggactacgagaaactcgccaccgatctgttggagtggatcaggaggacgatc
ccgtggttggagaaccgggttcctgagagcaccatggctgccatgcagcagaagctggag
gacttcagaggttaccgtcgcgtccacaaaccacccaaagtccaggagaaatgtcagctg
gagatcaacttcaacacgctgcagaccaaactgaggctcagcaaccggcccgcgttcatg
ccgtctgaggggaagatggtgtctgatgtctccaatgcatgggggagtctggagggggcg
gagaaaggctatgaggagtggctgctgaatgaaatccgccgactggagagactcgaccac
ctcgccgagaaattccgccagaaagcagcgatacatgaggcctggacagaaggtaaggag
gccatgttgaatcagaaggactacgagacggcgtctctgtctgagattaaagctctgctg
aagaaacacgaggcgtttgagagcgacctcgccgctcaccaggaccgcgtggagcagatc
gccgccatcgcacaggagctcaatgagctggagtattatgactctcccagtgtgaacgct
cgctgtcagaagatctgtgatcagtgggacgctctcggagtcctgactcagaaacgcagt
gaggccttgcagaaaacggagaagttattggagacgattgatcagctgtacctggagttc
gccaagagggcggcaccgtttaataactggatggagggagcgatggaggacctgcaggac
accttcatcgtccacaccatcgaggagatccagggcctgagcacggctcatgagcagttt
aaagcgacacttccggatgcagataaggagaaacaggccatcctggggatccacagcgag
atcgcgaaaatcgtacaaacctaccatgtcaacatgatgggcaccaacccctacacctcc
atcaccccccaggagatcaacaccaagtgggagagggtgagacagttggttcctcagaga
gaccaggcgctgatcgaggaacatgctcggcagcagaacaacgagcgtctgcgcagacag
ttcgctaatcaggctaacgtcatcggaccctggatccagaccaagatgcaggagatcggc
cgtatctctatcgagttgcacggcactctggaggatcagctgaataacctgcgtcagtat
gagaagaacatcgtcaactacaagccaaagatcgaccagctggagggggatcaccagcag
atccaggaggctctcatctttgataacaaacacaccaactacaccatggagcacatccgt
gtgggatgggagcagctcctcaccaccatcgctcgaaccatcaatgagatcgagaaccag
attttgactcgcgacgctaaaggcatcagtcaggagcagctgagcgagttcagggcctcg
tttaaccactttgaccgggatcactcgggcactctgggcgctgaagagttcagagcgtgt
ctcatcagtctgggcttcgatatcggaaacgacgctcagggggaggtggagtttgctcgc
atcatgagcatcgtggatcctaacagactcggggtcgtgacctttcaggccttcattgat
tttatgtctcgagaaacagcagacacggacacggccgatcaggtcatggcctcgtttaaa
gtgctggctggagacaagaactacatcctggcggaggagctgaggcgcgagttgccccct
gaccaggctgagtactgtatctcgcgcatggcgccctacagagggagcgacgccgtgccc
ggggcgctcgactacatgtccttctccaccgccctgtacggagagagcgacctctga
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