Clarias gariepinus (North African catfish): 128528616
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Entry
128528616 CDS
T10780
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04137
Mitophagy - animal
cgar04140
Autophagy - animal
cgar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128528616 (hif1aa)
04137 Mitophagy - animal
128528616 (hif1aa)
04148 Efferocytosis
128528616 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128528616 (hif1aa)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
128528616 (hif1aa)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
128528616
NCBI-ProteinID:
XP_053357565
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Position
8:complement(37401851..37417727)
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AA seq
607 aa
AA seq
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MTSGATAEKKRQSCERRKARCRDAARCRRVKETEVFNQLADQLPLHHSITESLDKASIIR
LTLSFLHLRSALNAVMMDEQSELDTQWSASCLKALDGFLMILSQDGDVVYTSETVSRCLG
IPQIDLSGQSVFDFTHPCDHEEIREMLVNRTGSCKKTKDEQSCLLRMKCTLTSRGRTVNL
RSATWKVLRCSGHVRVECAPLSVCDEGGTPTSYLVLICEPIPHPANIEVLLDSRTFLSKH
TLDMRFSYCDERITQLLGYDPEDLLQCSVYEFYHALDSDSLTKAHLNLFVKGQVCTGPYR
MLVKGGGFVWVETQATVIYNNKNSQPQCIICLNYVLSGVEEPELVLSLHQSTIKQETEDA
AGTERQTQSQEAATRTHEDMEEEEKSEEESALQADADVTLDFTNAGSETSELRDAPLYND
VMLPSTSVLSPLSPPTEPACATLSRLEDFPFPSPSAPTSSGRGSAQAEEDLELEMLAPYI
SMDNDYQLQTRTHADHLDSVQKITRTPTNPPETQQREQPDKDLSSTSRPSLKRKLETISL
SRATGLGSVFQVVTDSPQVKRSKVIVSEARPPAAMPETLTILLLPSDVLNQLMVGGAIIK
PLPYITR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggagccacagctgaaaagaaaagacagagctgtgagcggaggaaggcgagg
tgccgtgatgcagcgcgctgtaggcgggtgaaggagacggaggtgtttaatcagctggcc
gatcagcttcctctccatcacagcatcaccgagagcctggacaaagcctccatcatccgc
ctcacgctgagtttccttcacctgcgttcggctctcaacgcagtgatgatggacgagcag
tccgagctggacacgcagtggagcgcttcctgtctgaaggctttagacggcttcctcatg
attctctctcaggacggagacgtcgtttacacctcggaaacagtcagccgctgtctgggg
attcctcagatcgatctgtcaggacagagtgtgtttgatttcactcacccctgcgaccat
gaagagatcagggagatgctggtcaacagaacaggttcctgtaagaagacaaaggatgag
cagagctgcttgttgcgcatgaagtgcactctgaccagtagagggcgcaccgtcaaccta
agatcagcaacgtggaaggttctgcggtgttccggtcacgtccgcgtggagtgtgcgccg
ctcagcgtgtgtgacgagggcggtacgccgacgtcgtacctggtgctgatctgtgaaccg
attccacatccggccaacatcgaggttcttctagactccagaacgttcctgagcaaacac
acgctggacatgcgcttctcctactgtgatgagcggatcacacagttgctgggttacgac
cctgaggatctccttcagtgctctgtgtatgagttttatcacgctctggactcagacagt
ctcaccaaagcacatctcaacttgtttgtgaagggccaggtgtgtacaggtccataccgc
atgctggtgaagggcggaggctttgtgtgggtggagactcaggccacggtcatttacaac
aacaaaaactctcagccccagtgcatcatctgtctcaactacgtcctcagcggtgtcgag
gaacccgagctcgttctctctctccatcagtcgacgataaaacaggagacggaggacgct
gccgggacagagagacagacgcagagccaggaagcagcgactcggacacacgaggacatg
gaagaggaggagaagagcgaggaagaatcggcgctacaggccgacgctgacgtcacactc
gacttcactaacgcaggatcggagacgtcagagctcagagacgcccctctctacaatgac
gtcatgctgccctccaccagcgtcctgtcacccctgtccccgcccaccgagccagcctgc
gccactttgtcccggctggaggactttcccttcccgtcaccctctgctccgacctcatcc
ggtcgcggttccgctcaggcggaagaggatctggagttagagatgttggctccctacatc
tccatggataacgactatcagctccagactcgcacgcacgcagaccatctcgattctgtc
cagaaaatcaccaggacgcccacaaacccccccgagacgcagcagagagaacagccggat
aaagatctgtcttccacaagtcggccaagcctgaagagaaaactagaaaccatttctctg
tctcgtgccacagggctgggatccgtctttcaggtggtaaccgactcgcctcaggtcaag
aggtcaaaggtcatagtgtcagaggctcgtccaccagccgccatgcccgagactttgact
atactgctgcttccctcagatgtgttaaaccagttaatggtgggaggagccatcattaag
ccccttccatatatcactcgttag
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