Clarias gariepinus (North African catfish): 128528638
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Entry
128528638 CDS
T10780
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128528638 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128528638 (gbf1)
Membrane trafficking [BR:
cgar04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
128528638 (gbf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
DUF758
Motif
Other DBs
NCBI-GeneID:
128528638
NCBI-ProteinID:
XP_053357592
LinkDB
All DBs
Position
8:complement(19795689..19857130)
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AA seq
1868 aa
AA seq
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MVDKNIYIIHGEIATVVGAIKRNSRYSTHTTLDEDQDPLLSSFSHLKETLNNIKDLSEVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEGAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSFVGTNMKKLKMRAGGMTESSKWKKQKRSPRPSRHL
DMVRSSSGQMDQTQLSALSNNLSGGVPFIEQQGEGSAELPVSDSAASSISSPTADSGLSN
CSKATSKDDLTDLEGCSTATTPSTATSTYASMLDTQSEGRQVEHTQSASVESIPEVLEDR
DSLVDQSDAASVHDMDYVNPRGVRFTQSTQKEGAALIPYGLPCLRELFRFLISLTNPHDR
HNSDVMKHMGLQLLSVALEATHIAPYQSLLVLVKDELCRHLIQLLSEERINLYAASIRIC
FLLFESMRGHLKFQLEIYLKKLMDIITSENPKMPYEMKEMALEAVVQLWRIPSFVTELFI
NYDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVMNRT
AEQEHSETLTAEGDASVDSTTDAVTEASKGLFGSNGETVVESGVPSVCLPTSGHLMAEKM
KLGRQDQEEADSAEKKSPKKPQRFSSCLPDSQELMNIKNKKKLLITGTEQFNLKPKKGIQ
FLQEKGLLSSPMDTNEVAQWLRENPRLDKKMIGEFISERNNTELLDSFVNTFTFQGLRID
EALRLYLEAFRLPGEAPVIHRLLETFTDNWHKVNGNPFLSNDAGFALAYAVIMLNTDQHN
HNVRKQNIPMTVEQFKKNLKGVNGGTDFDQDMLEDIYNAIKNEEIVMPDEQKGLVKENYV
WSVLLHRGATSEGMFLHVHAGSYDHDLFTMTWGPTIAALSFVFDKSLEDTIIQKAIAGFR
KCAMISAHYGFSDVFDNLIISLCKFTTLNSESVENLPTVFGSNTKAQIAAKTMFNLAHRH
GDILREGWKNIMDAMLQLFRAELLPKSMVEVEDFVEPNGKISLQREETPSNRGESAVLSF
VNWLTLSGGAEQSGQRGPSTENQEAKQAALLCIKHCDPEKLITESKFLQLESLQELMKAL
ISVTPDEETYDEEDAAFCLEMLLRIVLENRDRVSCVWQTVRARLYHLCVHANESCFLVER
AVVGLLRLAIRLLRREDISSQVLLSLRLLLIMKPHVLSRVSREVAYGLHELLKTNAANIH
CTDDWYTLFTLLECIGAGVKPPAALQITSSNPDSDTGAQSDSEVSSYHQSEVTLDRGYTS
DSEVYTEHSRPRLPRSATEVEVGWLVVGKDDLENSKASLAPDSKSQTPLINQYSLTLGQD
LGLHDTKSLIKCVESLSFIVRDAAHVTPENFELCVKAIRVFVEASLNGGYRTHEKKKSHR
YDSKASRQRKKPREKDGVSRRAKPTSQRPSRSHSDDEEDEGVPASYHTVSLQVSQDLLDL
MHTLHTRAASIYSSWAEEQRHLEASGKKIEADSQTLWSSCWCPLLQGMAWLCCDARRQVR
MQALTYLQRALLVHDLQTLDAVEWESCFNKVLFPLLTKLLDNISPADVGGMEETRMRACT
LLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKNMLLVMDTA
GIFHCADSRTGYSDLWEITWERIDCFLPHLREELFKQAVMPEPVPSVPVEPTPASFPISP
PSPPVPSPVPVSTAPTEPKTPSRPASPQDLQTPSANGNDRSSPVPPSTPPMPTPVKSSSE
SPPSLTQSPLILQPLASPLQVGVPPMSLPIILNPALIEATSPVPLLPAPRPAGPADTSEV
KLNMQDYP
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaagaatatatacatcattcatggagagatagcaacagtggttggcgctatc
aagagaaactccagatatagtacacacacaacgctggatgaagatcaggacccgcttctc
agcagttttagtcaccttaaggagacactcaacaatatcaaagacctctctgaagtggag
cccaatgtgtttcttcgaccctttttggaagttgttcgctcagaggacacaactggacca
atcacaggccttgccctcacttctgtcaacaagttcctttcttatggcctcatagatgcc
aatcatgaaggagcagcagaggcgattgagaacatggctgatgcagtcactcatgccaga
tttgtggggacagacccggccagcgatgaagtggtacttatgaaaatcctccaggtttta
aggactttgctgctgactccagtgggtgcccatctgactaacgagtctgtgtgcgagatc
atgcagtcctgtttccgcatttgctttgagatgagactaagtgagctgctgaggaaatca
gccgaacacacgctggtggacatggtgcagctgctcttctccagattaccacagtttaaa
gaggaagctaaaagttttgtggggaccaacatgaagaagctgaagatgcgtgctggtgga
atgaccgagtcatccaagtggaagaaacagaagcgttctcctcgtccctctcgtcacctg
gatatggttcgcagctcctcaggacagatggaccagactcagctcagcgctctcagcaac
aacctctcaggtggagtgccgtttattgagcaacagggtgagggtagtgcagagttgcct
gtttctgacagtgcagcatcctctatatctagccctactgcagacagtggactgtccaac
tgctctaaagccacatccaaggatgacctcacagacctggagggctgctccacagccacc
actcccagcactgcaacttccacttatgccagcatgcttgacacgcagagtgagggtaga
caagtagaacatactcagtctgcctcagtagagtccattcctgaggtgcttgaggaccga
gattcgttagtggatcagtctgacgctgcatccgtgcatgacatggactatgtaaatccc
agaggagtgcgcttcactcagtctactcagaaagagggtgcagctctgatcccttatgga
ctcccatgtctgagagagctcttccgctttctcatttctctcaccaaccctcacgaccgc
cacaactcggatgtgatgaagcacatgggtttgcagctgctcagcgtggctctggaggcc
acacacattgctccctaccagtcacttctggtcctagtcaaagatgaactctgcagacat
cttatacagttattaagtgaagagcgaataaatttatatgctgcctccatacgaatctgc
tttcttctgtttgagagcatgcggggacatctcaaatttcagctggagatttatttaaag
aagctaatggacatcattacctcagagaacccaaagatgccctatgaaatgaaggaaatg
gcccttgaggcagttgtgcagctgtggagaatccctagctttgtgactgagctctttatc
aactatgactgtgatttttactgttctaacctttttgaggacctcaccaagctgctctct
aagaatgcttttccagtctctggacagctctacacaacccatcttctctcacttgaagcc
ctgttaactgttatagacagcacagaggcgcactgtcaggccaaagtgatgaacagaact
gctgagcaagagcattcagaaactttaacagctgaaggagacgcctctgtcgacagtacc
acagatgcagtaacagaggctagcaagggtttgtttggttctaatggagagactgtagta
gaatctggagtgccatcagtgtgtcttccgaccagtggtcatctcatggctgaaaagatg
aaactgggtaggcaggaccaggaggaggcagattcagctgaaaagaaaagtcctaaaaag
cctcagcgtttcagcagttgtcttccagactcacaggaactgatgaacattaaaaacaag
aaaaagcttcttattacaggaacagaacagtttaatttgaagcccaagaagggcattcag
tttctgcaggaaaaaggtctcctgagcagtccaatggacaccaatgaggtggcgcagtgg
cttagagaaaacccccgtctagacaaaaagatgataggagaattcatcagtgaaaggaac
aacacagagttgctcgacagttttgtcaatacatttaccttccaagggctacgtatagat
gaagcactgcgtttgtatctggaggctttccgacttcctggcgaagcaccggtcattcat
cggctcttggagaccttcactgacaactggcataaagttaacgggaatccattcctgtca
aatgatgctggatttgctttggcctatgctgtcattatgttgaacacggatcagcacaac
cacaacgttcgcaagcagaatattcccatgactgtagagcaattcaagaaaaatctgaaa
ggtgtaaatggtggtacagattttgatcaggacatgctggaagatatctacaatgccatc
aaaaatgaagaaattgttatgcctgatgagcagaaaggcttggtaaaggagaactatgtg
tggagtgtgttgctacacagaggggccacttctgaggggatgttccttcacgtgcatgca
ggcagctatgatcacgacctgtttacgatgacctggggcccaacaattgctgccctttcc
ttcgtgtttgacaagagcttagaggacactattatacaaaaagctattgcaggctttaga
aaatgtgcaatgatctcagcacactatggctttagtgatgtttttgataatttaatcatc
tccctttgcaagtttaccacactcaacagtgagtctgtagaaaacctgcccacagtattc
ggcagcaacaccaaagctcagatagcagcaaagacaatgtttaaccttgcacatcgtcat
ggtgatatcttgagagagggttggaagaatatcatggatgcgatgctgcagctcttcagg
gctgagctcttacccaaatccatggtagaggttgaggattttgtagagcctaatggaaag
atttctttacagcgtgaggagactccctcaaacaggggcgagtcagctgtactaagcttt
gttaattggttaacactgagtggtggagcagagcagtccggacagcgaggcccctccact
gagaatcaggaggccaagcaggctgccctgctctgtataaagcattgtgatcctgagaaa
ctgatcacagaaagcaagtttctgcagctagaatctctacaggagcttatgaaggccctc
atctcagtgacgcctgatgaagagacgtatgatgaagaagacgctgctttctgtctagag
atgcttctgcgcattgttctagaaaatagggaccgggtatcatgtgtgtggcagactgtt
cgtgcccgtttgtatcacctgtgcgtgcatgccaatgaaagttgcttcctggtggaaaga
gctgtagtgggactgctgagacttgctatacgtttgctgcgccgagaggacatcagctca
caggtactgctctctctacgcctgctactgataatgaagccccacgtgttgtccagagtg
agtcgagaggttgcctatggtctacacgagctgctcaaaaccaatgcggccaacatccac
tgcactgatgattggtacactctttttacattgttggagtgcatcggtgctggagtcaaa
cctccagctgcactgcagatcaccagcagcaaccctgacagtgacacaggtgctcagtct
gacagtgaagtgagctcataccaccaaagtgaagtcactttggaccgaggctacacctct
gactctgaggtctacaccgaacacagcaggcccagattaccccgctctgccactgaggtt
gaagtgggatggcttgtggttggtaaggatgacctagaaaacagtaaggcatctcttgct
cctgactctaagtctcagactcctcttattaaccagtacagtttaaccttgggtcaagac
ctgggcctgcatgatacgaagtccctaatcaagtgcgtggagtcactgtctttcattgta
cgcgatgctgcacacgtcacgcctgagaactttgaactttgtgtaaaagccatccgagtg
tttgttgaagccagtcttaatggaggttatcgcactcatgagaaaaaaaagagccacaga
tatgattcaaaagctagtaggcaaaggaagaagccacgggagaaagacggtgtgtcccga
cgtgctaagcccactagtcagcgaccctctcgttcccatagtgacgacgaggaggatgag
ggggtgccagcaagctaccatacagtgtctttacaggttagtcaggacttgttagatctg
atgcacacgctgcatacccgggcagccagtatctacagctcatgggcagaagaacagcgc
catctggaggccagtggaaagaagattgaagctgactctcaaacattgtggtcaagctgc
tggtgtcctttgctccaaggtatggcctggctgtgctgtgatgctcggaggcaggttcgg
atgcaggccctcacttacctccagagggccctccttgtacatgatctgcaaacactggat
gctgtggagtgggaatcctgtttcaacaaggttttgtttccgctgctaactaagctcttg
gacaacatcagcccagcagatgtcggcggtatggaggagaccaggatgagggcctgcaca
ctgctctccaaggtgttcctccagcatctctcgccactgctttctctgcctacctttgct
gctctttggcttactatcttggacttcatggacaagtacatgcatgctggctccagtgac
ctcctgttggaagccatacctgagtctctaaaaaacatgctgctggtcatggacacagct
gggatcttccattgtgcagactctcgtacaggctactctgatctctgggagatcacttgg
gagaggatcgactgcttcctaccccaccttagagaggagcttttcaagcaagccgtcatg
ccagaacctgtccccagtgttcctgtagagcctactcctgcttcttttccgatttctcca
ccctctccaccggtgccatcccctgtaccagtgtcaactgcccctacagagccaaagacc
cccagcagacctgcatctcctcaggacttacaaacacccagtgccaatggaaatgataga
tcatctccagtgcctccctccactcctccaatgcctactccagttaaaagctcgtctgaa
tccccaccctctctcactcagtctcctctaatactccagcctctagcatctccactgcag
gtgggagtaccccccatgtccctgccaatcattttaaatcccgcccttatagaagccaca
tcgcctgtacccctgcttccagcacctcgtccagctggacctgctgacacatctgaggtc
aaattaaacatgcaagattatccttga
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integrated database retrieval system
