Clarias gariepinus (North African catfish): 128528647
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Entry
128528647 CDS
T10780
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04814
Motor proteins
cgar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
128528647 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128528647 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128528647 (dctn1b)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128528647 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128528647 (dctn1b)
Membrane trafficking [BR:
cgar04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
128528647 (dctn1b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
128528647 (dctn1b)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
128528647 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Gemin7
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
128528647
NCBI-ProteinID:
XP_053357615
LinkDB
All DBs
Position
8:23036237..23071062
Genome browser
AA seq
1262 aa
AA seq
DB search
MSQMKRNTYSRTTSSGSSRMSSDGGGRPVKVGSVVEVIGKGHRGTVAYIGNTLFASGKWV
GVILEEARGKNDGTVQGKRYFTCTENHGIFVRQSQIQLVDDGADTTSPDTPEAATSKVLK
REILEAPKSNKVRGAKPKKTPAPRKTTVRRPKARAGVGVKVGSGSASAAEMSSSEPSTPA
QTPLAAPVIPSPVGTSPVAPPIPVPSKEEEALRAQVKDLEEKLETLRMKRAEDKVKLKEL
EKHKIQLEQLQEWKSKMQEQQNDLQKQLKEAKKEAREALEAKEHYMEEMADTADAIEMAT
LDKEMAEERAESLQQEVDALKEKVDELTMDLEILKHEIEEKGSDGAASSYHVKQLEEQNG
RLKEALVRMRDLSATEKQEHSKLQKQMEKKNFELETVRMQKEKIQEEMKMAEKTIDELKE
QVDAALGAEEMVETLTERNLDLEEKVRELREAVTDLEAINEMNDELQENARETELELREQ
LDLSAASVREAEKRVEAAQETVADYQHTILKYRELTAHLQEVNRELMNQQEATAEPQQPA
EIFDFKIKFAETKAYAKAIEMELRKMEVAQANRQVALLTTFMPDSFLRHGGDHDGILVLL
LIPRLICKAELISKQAQEKFDLTESCSQRPGMRGAVGEQLSFAAGLIYSLSLLQATLHKY
EYALNQCNVEVYKRVGSLYSEMSVHERSLDFLIDLLHRDQLDETVNVEPLTKAIKYYQHL
YSIHLAEQTENCTMQLADHIKFTQSALDCMAVEVGRLRAFLQAGEEETLFSVLLKDLDTS
CSDIRQFCKKIRRRMPGTDAPGIPAALNFGPQVSETLAESRRQLAWVNAVLQEVAAAGAQ
LIAPLSEHEGLPTLKLEDMAFKAAEQIYGSQGINPYECLRQSCNVVIATMNKMATAMQEG
EYDSEKPQTGLAPVEVRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEAN
VRLSLLEKKLDNASKDADEQVEKIQTVLDETQSLLKKKEKEFEETMDALQADIDQLEAEK
TELRQRINSQSKMTIEGLRGSPASGIASIVTGVTTEDQKGAVGVCAAGGVQVIDSPLLTQ
QIEAQRLGIKRLKNENNILKAEKMRAQLASLPPLNVSKLSWREGCRPEVLSSALYRKTDQ
LLETLLQMSANVKVVDITGKSPVSPSAQLLEQTARLQSLSETLDRLKDEVAEHVVSQRPG
AQASSDFATFPCTSFVKAKEEKMRDKVLVGRVMVPCARGQEQIHRLVLSQHQLQRVHRLL
QT
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaatgaagaggaacacatacagcaggaccactagcagtggcagcagcaggatg
agttctgatggaggaggacggccagtgaaggtgggctctgtggtggaggtgattggaaaa
ggtcatcgtggcactgtggcctacattggcaatacactctttgcatctgggaaatgggtg
ggagtcatcctagaggaggccagaggcaagaacgatggtactgtgcaaggcaagcgctac
ttcacgtgcactgagaaccatgggatatttgtgcggcagtcacagatccagttggtggat
gatggcgcagacacaacatcacctgacactcctgaagctgccacatctaaagttctaaag
agggaaattctggaggctcccaagtccaataaagtgcgaggagccaaacccaaaaagact
cctgcgcctcgtaagactacggtcaggaggccgaaggcgcgggcaggtgttggagtaaag
gtgggttctggctcggcttcggcagcagagatgagcagcagcgaacccagcacacctgct
caaaccccactagcagctcccgttatcccctcccctgttgggacgtcccctgtagcgcca
cccatcccagtgccgagcaaggaggaggaggctctacgggctcaggtgaaagacctggaa
gagaagctagagacactgcggatgaaacgggctgaggataaggtcaagctgaaggagctg
gagaagcacaagatccagctggagcagctacaggaatggaagagcaagatgcaggagcag
caaaacgatttgcagaaacaactcaaagaggccaaaaaggaagcaagagaggctttagaa
gcgaaggaacattatatggaggagatggcagacactgctgatgctattgagatggccact
ttagataaagagatggctgaggagagggcggagtctctgcagcaggaggtcgatgcactc
aaagagaaggtggacgaactgaccatggacctggagatcctcaaacatgagatagaggaa
aaaggctctgatggtgcagcatctagttatcatgtaaaacaactagaagaacaaaatggc
cgtctgaaggaggccttagtgaggatgcgtgacctgtcagccactgagaaacaggagcac
tcaaagctgcagaagcaaatggaaaagaagaactttgagctggagacagtgaggatgcag
aaagagaaaattcaagaggaaatgaagatggcggagaagaccatagatgagcttaaagaa
caggtggacgcagctcttggagcagaagagatggtggagactctaacagagcgcaatctg
gacctggaagagaaagtgcgggagctcagagaggccgtcaccgacctggaggccattaat
gagatgaatgacgagctgcaggagaacgccagagagacggagttagagctgagggagcag
ctggacctgagtgccgccagtgtgcgagaggctgagaaacgcgtagaagctgcgcaggag
actgtggcagattaccaacacaccattctgaaatacagagagctgaccgcccacctgcag
gaagtgaacagagagctaatgaatcagcaggaggccaccgctgagccgcagcagcctgcc
gagatcttcgacttcaagatcaagtttgcagaaaccaaagcatatgcaaaggccattgag
atggagctgcgtaagatggaagtggctcaggcaaacagacaggtggctcttctcaccacc
ttcatgcccgactccttcctgagacacggaggggaccatgacggcatccttgtcttgctg
ctcattcccagactaatctgcaaggcggagctgatcagtaagcaggcgcaggagaagttt
gatctgaccgagagctgctctcagagaccgggcatgagaggggcagtgggggagcagctc
agctttgctgccggacttatttactctctgagtctgcttcaggcaaccctacataaatat
gaatatgcccttaatcagtgtaatgtggaggtctataagcgtgtgggttccctttactcg
gaaatgtctgtgcatgagcgctcattggacttcctcattgatttgctgcacagggatcaa
ctagacgaaactgtgaatgtggagccacttactaaggccattaaatattatcagcacctt
tatagcatccatctagctgaacagacagagaactgcaccatgcagctagctgaccatata
aagtttacccagagtgctctggactgcatggcggtggaggtgggtcgtctgcgtgccttc
ctgcaggcaggagaggaagaaacactattttctgtgctgcttaaagacctggacacttct
tgtagcgacattcgccagttttgcaaaaagatccgccgtcgcatgccaggcactgatgca
ccaggcatccctgcagctctaaactttggtcctcaggtgagtgagaccctggcagaaagc
agaaggcagctggcctgggtgaatgctgtgctgcaggaggtggctgcagcaggagctcag
ctcattgcaccacttagtgaacatgagggtctgccaacacttaaactggaggacatggcc
ttcaaagcagctgaacagatctacggctcacagggtataaatccctatgagtgtctgcgc
cagtcctgtaacgtcgtcatcgcaaccatgaataaaatggccactgctatgcaggaggga
gagtacgactctgagaaaccccagactgggttggcaccagtggaggtgcgagcagctgca
ctgagggcagagatcactgatgccgaaggacttggtttaaaattggaagacagagagacg
gtcatcaaggagctcaagaaatcccttaaaataaagggtgaggagctgagtgaggccaac
gtgcgtctgagtcttctagagaagaagctggacaatgcatcaaaggatgcagatgaacaa
gttgagaaaatccagaccgtactggatgagacgcagtcactcctaaagaagaaggagaag
gaatttgaagagaccatggatgctctgcaggctgacatagatcaacttgaggcagaaaag
acggagctgagacaacggataaatagccaatcaaagatgaccatcgagggactcagagga
agtcctgcatctggcattgcatccattgtgactggtgtcacaactgaggatcagaaaggt
gctgtaggagtgtgtgctgcaggaggggtgcaggtgatagattcgccgctgttgacgcaa
cagattgaagctcagagactcggcataaagcgcctgaagaatgaaaacaacatcctaaag
gccgaaaagatgcgtgctcagttagcctcgctccctccactaaatgtgtctaagttgagc
tggcgtgagggctgtagaccagaggtcctatccagcgctctctatcgcaaaacagaccaa
ctcctggaaaccctgctgcagatgagtgccaatgtcaaagtcgtagacatcactggaaaa
tctccagtgagtcccagtgcgcagcttctcgagcagacagcaaggctgcagtctctcagt
gagactcttgataggctcaaggatgaagtggcggagcatgtggtttctcagagacctgga
gctcaggcttcgtctgacttcgctactttcccatgcacctcatttgtaaaggctaaggag
gagaagatgagagacaaagtgttggttggtcgtgtgatggtgccttgtgctcggggtcag
gagcagattcaccggcttgttctctctcagcaccagctgcagagagtgcatcgtcttctt
cagacttaa
DBGET
integrated database retrieval system
