Clarias gariepinus (North African catfish): 128528814
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Entry
128528814 CDS
T10780
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128528814 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128528814 (valopa)
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128528814 (valopa)
G protein-coupled receptors [BR:
cgar04030
]
Rhodopsin family
Vision
Opsin
128528814 (valopa)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srsx
7tm_4
TAS2R
Motif
Other DBs
NCBI-GeneID:
128528814
NCBI-ProteinID:
XP_053357938
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All DBs
Position
8:8838763..8857882
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AA seq
383 aa
AA seq
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MGSFAGNYTQVAEVLQPDDPFFGPVKSIAPWTFKVLAGWMAVITAMSLSENFLVILVTYK
FKQLRQPLNFVIVNLAVADFFMSLIGGTLSVVTNHRGYFFLGSWACVLEGFAVTFFGIVG
MWSLSTLAFERYFVICRPLGNVRLRVKHAALGLLFVWIFSFIWTILPVLGWSSYTVSKIG
TTCEPNWYSGDPHDHTFIITFFLTCFILPLAVIIVCYSKLLRKLRKVSNSHGRLVNARKP
DRQVSRMVVVMIIAFMVAWTPYAVFSVIVTIHPTIYLDPILAAIPAFFAKTAAVYNPIIY
VFMNKQFRKCLIQLLSCSGNSTVEVNQHMDEAGMTGESNTGEMSAIAARIPAASTTTPNT
NEQHSNSCVYSQLPIPENKVCPM
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgtttgctggtaattacacacaagtggctgaggtgctccaaccggatgatcca
tttttcggacccgtgaaatccattgcgccgtggacctttaaagtgttggcaggatggatg
gctgtgatcacggcgatgtctctgtctgaaaactttctggtcattctggttacttacaag
tttaagcaactcagacagccgttaaactttgtcatagttaatttggcagttgcagacttt
ttcatgtcactgatcggtggcactttaagcgttgtcacgaatcaccgcgggtatttcttc
ttggggtcctgggcttgcgtgctcgagggatttgctgtcacttttttcggtatagtgggt
atgtggtccctgtctactcttgcattcgagagatactttgtgatctgtcgtcctctggga
aacgttcgtctgcgggttaaacatgcagcactgggactgctgtttgtctggatcttctct
tttatctggaccattttacctgtactgggctggagcagttacacagttagcaagattggc
accacatgtgaacccaactggtactctggtgaccctcatgaccacacattcattatcact
ttctttcttacctgtttcatcctgcctctggctgtcatcattgtgtgctacagcaagctt
ctgcgtaagctgagaaaggtgtccaactctcatggcaggttggtaaatgcccggaagcct
gaccggcaggtgtctcgtatggtggtggtgatgattatagcctttatggtggcctggaca
ccatacgctgtgttctctgttattgtcactattcatccaaccatctacttggaccctata
ctggctgctattccagctttctttgcaaaaactgcagccgtctacaaccccatcatctac
gtctttatgaacaaacagtttaggaagtgcctgattcagctgctcagctgcagcggcaac
tccacagtggaagtgaaccaacacatggatgaagcaggcatgaccggtgagagcaacact
ggcgagatgtcagccatagctgcccgaatccctgctgctagcactactacacccaatact
aacgagcaacacagcaactcctgcgtctacagccagctgcccatcccagaaaacaaagtc
tgccctatgtaa
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