Clarias gariepinus (North African catfish): 128528891
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Entry
128528891 CDS
T10780
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128528891 (btaf1)
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128528891
NCBI-ProteinID:
XP_053358034
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Position
8:9787861..9831064
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AA seq
1865 aa
AA seq
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MAVSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLLCKVLIYLRSPNWDTRI
AAGQAVEAIVKNIPAWNPAPKPKEESHVEDMSPEDGSSDRLSFYRFDISRLLRHGASLLG
SAGAEFEVQDDKSAEVDPKERLARQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDYTCSS
NVNRSQTGKVVGFQSLRSHTPMQAAEFIDSEFRPGMSNRQKNKAKRMAKLVAKQRSRDLD
PNEKSNDSFEGEPEEKRRKTTNVVIEQPATENKVLIDNIPDNSSLFEETQEWPLESFCEE
LCNDLFNPSWEVRHGAGTGLREVLKCHGAGGGKMVGSTSEQLAQQHQDWLEDLVIRLLCV
FALDRFGDFVSDEVVAPVRETCAQTLGVALKHMTECGVTMTVDVLLKLLTEDQWEVRHGG
LLGIKYALAIRQDLISQLLPRVLPAITEGLQDLDDDVRAVAAAALIPVVEGLVQLQPAKV
PFIVNTLWDALLELDDLTASTNSIMTLLSSLLTYPQVLQCSMQQSLTILVPRVWPFLRHT
IASVRRAALETLFTLLSKADQSCAMWLNPILQDMLRHIFQSCILESNQEILDLIQKVWVE
LLKQVPQQYVVAASCPWMGAWLCLMMQAPHIPIDLNMLLEVKARSKEKASGKSRQGGQQV
KEIVQEYIGGADTITEDPASRDYVVTRARLMAAKLLGALCNCICDPRLNNSTQEIRPAES
LAQLLLFHLNSKSALQRIAVSIVLCEWASLQKECEMVSSVVQPRLLAILSEHLYYDEIAI
PFTRMQNECKQLIALLADAHIDVREKINCNVFTIDQANDLVTTIFSEATASLNLKSRQLQ
SLESKRQQACSTVAETSAEWQQMHLRVHTFAACAVVGLAALPEKLNPLVRPLMEAVKKEE
NTLVQGYAASSIARLLQLCTGRTPCPNSKIIKNLCSSVCVDPVLTPNAECPVPPHMPPTQ
DGCKTNISEKDGMHHMVNKTKGIITLYRHQRAAFAITSKRGPAPKLQKTSPNDLSPGTSI
STETDESKKPILVQRRGAEFSMMTIARHFGPGLVKDLPCLWESMIGPLKALGDILGCDSR
QLLEKGDMVAQELVNSLQVLEVSTGAMAQELISLLLEQLPLLCACLQHPYTSVRHMAARC
FGVFSKIATMETMECFLEQVLPWLGAIDDSTKQEGAIEAMACVMEQLDVDIIPYIVLLVV
PVLGRMSDPSDSVRFMATQCFATLIRLLPLEAGIPNPPTMSDELIRQKARERHFLEQLLD
SRKLENYTIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDH
YLRAQEYARTKAADCCPLPSIVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERARL
QHQVKKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLSANYRV
ILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAM
EALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVNVDDVLS
PTAQEDEDKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEHKRISEQLTSQNSSLRDI
QHAPKLSALKQLLLDCGLGSSGSSDVSTEAVVAQHRVLIFCQLKSMLDIVEHDLLKPQLP
TVTYMRLDGSVPAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNP
MRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASLQSMG
TDQLLNLFTLDKDNKVDKSEMASSSSSSSSGKGSIKSVLDGLGELWDQQQYEAEYDLDNF
MLSLH
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctcgaggcttgagcgtctgttcatcttgttggacactggcacgactccagtg
acaaggaaagctgccgctcaacagctgggagatgtggtcaagcttcatccacatgagctg
aataatctgttatgcaaggttttaatatatttgaggagtcctaactgggacacgcgaatt
gcagctggtcaggcagtggaggccatagtaaaaaatattcctgcatggaacccagctccc
aagccaaaggaagagtcccatgtagaagacatgtctccagaggacggctcttcagacaga
ctcagtttttacaggtttgacatctctcgtttgctcagacatggagcgtcactgcttggg
tcggccggtgcagagtttgaagtgcaggatgacaagtcggctgaggtcgaccccaaggaa
cgtctggcccgacagagaaaattgctccagaagaaacttggtctggatatgggtgcggct
ataggtatggatacagaagagctgtttaatgatgaagacttggactatacctgttcctcc
aatgtaaatagatcccagactggcaaggttgttgggttccagagtctccgcagccatacg
cccatgcaggcagcagagtttatagattcagaattccgtcccggcatgagcaatcgtcag
aagaacaaggctaaaaggatggccaagctggtagcaaagcaaagatctagagatttagac
cctaatgaaaaaagcaatgacagctttgaaggagagcctgaagagaaacggaggaaaact
acaaacgtagtcatcgagcagccggctactgagaacaaagtcttaattgataacattcct
gacaactcaagtttgtttgaggagactcaagaatggcctctggagagtttttgtgaagag
ctttgtaatgacctgttcaatccatcgtgggaggtgaggcatggtgcaggcacaggcttg
agagaggtgctgaagtgtcatggtgcaggaggagggaagatggtgggcagcacttcagag
cagttagcccagcagcatcaagactggttggaggacctggtcatcagacttctgtgcgtc
tttgctcttgaccgctttggagactttgtgtctgatgaggttgttgctccagtcagagaa
acttgtgcacagacactgggcgtggccttgaagcacatgactgaatgtggtgttaccatg
acagtggacgttttgttgaagctgcttacagaggatcagtgggaggttcggcacggcggg
ctgttgggcatcaaatatgccctcgctatccgacaggatcttatttcacaactgcttcct
cgagtacttcctgccatcacagagggtctccaggatctggatgacgatgtgcgtgcagta
gcagctgctgctcttatccctgtagtggagggactggtgcagcttcagcctgctaaggta
ccttttatagtgaacacactgtgggatgctcttctggagcttgatgacctcacagcctct
acaaacagcatcatgactttactatcgtccctgctcacataccctcaggtccttcagtgc
agcatgcagcagtccctgaccattttggttcctcgagtgtggccatttcttaggcacact
attgcttctgttcgacgtgctgccttagagacgcttttcactttgctgtccaaggctgat
cagagctgtgctatgtggttaaaccccatcctgcaagacatgctcaggcacatatttcag
tcgtgcattctcgagagtaaccaggaaatcctcgatcttatccagaaggtctgggtcgag
ctgttaaagcaggtccctcagcaatatgttgtagcagccagctgtccatggatgggtgcc
tggctctgtttgatgatgcaagcacctcacattcccattgacctcaacatgttattggag
gttaaggctcgatccaaggaaaaggcgagtgggaagtctcggcagggtggacagcaggtg
aaggagattgtgcaagagtatatcggaggagccgacacgatcactgaagacccagcctcg
agagactatgtagtgactcgtgccaggctcatggctgccaaactgctgggagcgctgtgc
aactgtatctgtgaccctcgattaaataactctactcaagaaattcgaccggcagagtca
ctggctcagcttctcctcttccatctcaactctaagtcggctcttcagcgaattgctgtg
tccatagtgctgtgtgaatgggcatccttacagaaggagtgcgagatggtgtccagtgtg
gtccagcctcgtctgctggccattctgtccgaacatttgtactacgatgaaatcgccatc
ccctttacacgcatgcagaatgaatgcaaacagctcatcgctctccttgctgacgcacat
atcgatgtgagggaaaaaatcaactgcaatgtcttcacaatcgatcaggccaacgacttg
gtgaccaccatcttttctgaggccacagcatcattaaacttgaaatctcggcagctgcag
tcattggagagtaagcggcagcaggcgtgctctacagtggcagagaccagtgctgagtgg
cagcagatgcatctacgtgtgcatacttttgcagcatgtgctgtggtgggcctggcagca
ctgcctgaaaagctaaaccctttggtgcgcccacttatggaggctgttaagaaggaggag
aacacactggtgcaggggtatgctgcctccagcatagcccgcctgctccagctctgcaca
ggccgcacgccttgccccaattcaaaaattattaaaaacctttgcagctctgtgtgtgtg
gaccccgttctcacacccaatgcagagtgccctgttccgccacacatgcctccaacacag
gatggctgtaaaacaaatatatcagagaaagatggcatgcatcacatggtgaataaaaca
aagggcatcatcaccctttaccgacatcagagagcagcttttgccatcaccagcaagaga
ggccctgcccccaaattgcaaaaaacgtcacccaatgatctttccccaggcacctccatc
tccacagaaactgatgagagcaagaagccaatccttgtccagaggagaggtgcagagttc
tcaatgatgaccatcgctaggcactttgggcctggtctcgtcaaggatttgccctgtctt
tgggagtctatgattggtccgctgaaggctctgggagacatactaggttgtgattccagg
cagctcttggagaaaggtgacatggtagctcaggagctggtcaattctctacaggttttg
gaggtcagcacaggagccatggctcaggagcttatatctctgctgttggagcagctgcct
ctgctttgtgcatgtctccagcacccatacacatctgtgcgtcacatggctgctcgctgt
tttggtgtgttcagtaaaatcgctactatggaaaccatggaatgcttcctggagcaggtg
ctaccatggttgggggcgattgatgacagcaccaagcaggagggagccattgaggcaatg
gcctgtgtgatggagcagctggatgtggacatcataccctacattgtgctgttggtcgtt
cctgtgctgggccgcatgagtgatcctagtgacagtgtgcgcttcatggccacgcagtgt
tttgccacgctcatacgcctgctgcctctggaggctggcatccctaacccacccaccatg
tcagatgagctaattcgtcagaaggcgagagagcgtcactttttggagcagttgttggat
agcaggaagttggagaattacacaatccctgtccctattaaagcagaactcaggaaatat
cagcaggatggagtgaactggttgtccttcctaaataaatacaagctgcatggaatcctg
tgtgatgacatgggtttgggtaaaacccttcaatccatctgcattctcgctggtgaccac
tacctcagagcacaagagtatgccaggactaaggctgccgactgttgtcctctgccctcc
atagttgtgtgcccccctactttaacaggccactgggtggatgaagtgggcaagttctgc
tctaaggagtacctgaaccctttgcactatacaggtcctcctacagagagagcacgatta
cagcaccaagtaaaaaagcacaaccttgtggtagcatcatacgatgtagtacgaaacgac
atcgacttttttaggaatattaaatttaattactgtatccttgatgagggtcatgttatt
aaaaacgggaagaccaaactatccaaagctatcaagcagctgtctgccaactacagagtt
atcctctcaggaactcccatccagaataatgttttggagctgtggtctctctttgacttc
cttatgccaggctttctgggtacagagcgccagtttgctgctcggtacgggaagcccatc
ctcgctagtcgagacgccaagagctcttcccgtgagcaggaagcaggggttttggctatg
gaggctctgcatcggcaggtgctaccctttctcctaaggaggatgaaggaggatgtcctt
caagatctgccacccaagattatacaagactattactgcaacctgagtcccctacaggtt
cagttgtatgaggactttgccaaatctcgggcaaaggtgaacgtggacgatgtcctctcc
ccaacagcccaagaggatgaggacaaacccaagctgaaggccactggacatgtgttccag
gctcttcaatacctgaggaagctttgtaaccatccagcactggtcttgacacctcagcat
cctgagcacaagcgcatcagcgagcagctcacctcccagaattccagtctccgggacatc
cagcatgcaccaaaactctctgcacttaaacagttgctgctagactgtggtctgggctcg
tccggctcctcggatgtcagtacagaggcagtggtggctcagcaccgtgtgctgatcttc
tgccagctaaagagcatgttggacatcgtggagcatgaccttctaaagcctcagctgcct
acagtcacctacatgcgtctggacggcagtgtgcctgcaggcctgcgccattccattgtc
tccaggtttaacaacgacccatcaatagatgtgctgctcctgacgacacacgtaggtggt
ctgggcttgaacctcacaggagctgatactgtggtgtttgtggaacatgactggaaccca
atgagagacctgcaggctatggaccgtgctcaccgaatagggcagaaacgtgtggtgaac
gtgtaccgtctgatcactcgtggcactttggaggagaagatcatgggtctgcaaaagttt
aagatgagtatagctaacaccgtgatcagccaggagaatgccagtctacagagcatgggc
acagaccagctgttgaacctttttactctggacaaggacaataaagttgacaagagcgaa
atggcgtcatcctcctcctcctcctcctcagggaagggcagtataaagtctgtactggac
ggcctgggggaattgtgggaccagcagcagtatgaggcagagtatgatctggacaatttc
atgctctcgctgcactaa
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