Clarias gariepinus (North African catfish): 128528920
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Entry
128528920 CDS
T10780
Symbol
brf1a
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128528920 (brf1a)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
128528920 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
128528920
NCBI-ProteinID:
XP_053358087
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Position
8:complement(36400885..36447312)
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AA seq
676 aa
AA seq
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MRKCKNCGGTDVDVDQARGDAVCMGCGSVLEDNIIVSEVTFVESSGGASSAVGQFVASDS
QGHVPSLGGNLMGMGKESRAQTLQNAKRNINHLGRQLQMNQHCLDTAFNFYKMALCKRLT
RGRKSAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLVLARELCINAPAIDP
CLYIPRFAHMLEFGEKSHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMHEFR
RTIKDVIGVVKVCEATLRKRLNEFEETPTSELTIDEFMRVDLDQECDPPSFKAGQRKLRL
QKIEEELAKKIDDVQGEICGYQDEIEMELESCRPKSRGIYSAYSKNDDAVSVTSSSMLDL
DEEDEDLRVAASHLNQDLPGDGDEPRDEEQQEAEVEEGERDSRSQRPSLEALLGPLPTAA
SLGLSDSINKCVGEEKENENEQTADGGGELDLSGIDDDELEWYILNEKEVKVKTELWMLE
NADYLKEQKEKEERIAKEKELGIYKEKKPKKPAQRRAPIDASTADEAIEKMLEQKRISSK
INYDVLKDLNRASVKSPPPAVKESPGRGAQGRTPSARPRRLNEGAATLATPASNFGKRLR
PLISGQPAKKPLLDQLVSEAPAAPAAVTQNAVVVESGPVAYEDVGEEEDEEEEEQCVSAM
QLMGGDDYGYDFDDDD
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagtgtaagaactgcggtgggacggatgtagacgtggaccaggcccgcggagac
gccgtgtgtatgggctgcggctcggtgctcgaggacaacatcatcgtctccgaggtgacc
ttcgtggagagcagcggcggcgcctcgtccgcggtcggccagttcgtggcgtcggactct
cagggacatgtcccgtctttgggtggaaacctcatggggatgggaaaagagtccagagcg
cagacgctacagaacgcaaagaggaatattaaccacctgggccgccagctgcagatgaac
cagcactgcctggacaccgccttcaacttctacaagatggcgctgtgtaaacgcctgacc
cgcgggaggaagtcggcccatgtcatcgccgcctgcctctacctggtgtgtaggacggag
ggcacgccccacatgctgctggatctcagcgatctgctccaggtcaacgtctatgttctg
gggaaaacgtttctggtgttggccagagagctctgcatcaacgctccggccatagatccg
tgtctgtacatcccccgcttcgcccatatgttggagttcggtgagaagagccacgaggtg
tccatgacggcgctgagactcgtccagaggatgaagagggactggatgcacacaggacga
aggccttcggggctctgcggagcagctctgctggtcgccgcacgtatgcacgagttccgt
cgcaccatcaaagacgtgatcggtgttgttaaagtgtgtgaggccacactaagaaagagg
ctgaacgagtttgaggagacgcccaccagcgagctgaccatcgacgagttcatgagggtg
gatctggaccaggagtgtgacccgccctcttttaaagccggacagaggaagctccgcctc
cagaagattgaggaggaactggctaagaagatcgacgacgttcagggtgagatctgtggc
tatcaggatgagattgaaatggagctcgagagctgtcgaccaaaatccagagggatctac
tcagcttattcgaaaaatgacgatgccgtctccgtgacgtcgtccagcatgcttgatctt
gacgaggaggatgaagacctgcgtgtggcggcgtctcatcttaaccaagacctgccgggt
gacggagacgagccgcgggacgaggagcaacaggaagcggaagtggaagagggagagcgc
gattctcggtcccagcggccgtctctggaggctctgctcgggccgctgcccaccgccgcc
agcctcggcctgtccgactccatcaacaagtgcgtaggagaagagaaggagaacgagaac
gagcagacagcggacggcggcggtgagctggacctgagcgggatcgacgacgacgagctc
gagtggtacatccttaatgagaaggaggtgaaggttaagaccgagctctggatgctggag
aacgcagactacctcaaagagcagaaagagaaggaggagaggatagcgaaggagaaagag
ctcggcatctacaaggagaaaaagccgaagaagccggctcagcggcgagccccgatcgac
gccagcacggcggacgaggccatcgagaagatgctggagcagaagcggatctccagtaag
atcaactacgacgtgctgaaggacctgaaccgcgcgagtgtgaagagcccgccccccgcg
gtcaaggagtccccgggacgcggcgcgcagggcaggacgccgtcagcacgtccccgcaga
ctcaacgagggcgccgccaccctggccacgccggccagcaacttcggcaagaggctacga
ccactgatctcgggacagcctgctaagaaacctctcctggaccagctggtgtccgaggct
ccagccgcgcctgctgcggttacccagaatgccgtggtggtggagagcgggcccgtggcg
tatgaagatgtgggggaggaggaggacgaggaagaggaggagcagtgcgtcagtgccatg
cagctcatgggaggagacgattatggctacgactttgacgatgacgactga
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