Clarias gariepinus (North African catfish): 128528959
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Entry
128528959 CDS
T10780
Symbol
lhcgr
Name
(RefSeq) lutropin-choriogonadotropic hormone receptor
KO
K04248
lutropin-choriogonadotropic hormone receptor
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04020
Calcium signaling pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
128528959 (lhcgr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128528959 (lhcgr)
04081 Hormone signaling
128528959 (lhcgr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128528959 (lhcgr)
G protein-coupled receptors [BR:
cgar04030
]
Rhodopsin family
Peptide
Lutropin-choriogonadotropic hormone
128528959 (lhcgr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_14
LRR_R13L1-DRL21
CSRNP_N
Motif
Other DBs
NCBI-GeneID:
128528959
NCBI-ProteinID:
XP_053358154
LinkDB
All DBs
Position
8:complement(28185609..28204004)
Genome browser
AA seq
755 aa
AA seq
DB search
MIRFVRKFDLEKRLFTVTCPVRAFADYTNKKGNSLKTTNGRQAFRMRTSLFILIVMMCQC
DCLRFVCPEVCRCSIKTISCNSATEAAAQKRQQVSRLVLNYIHLRTIPSFSFDGLKGVKR
IEIAQSVTLETIETQAFNNLLNLSEISIQNTRSLVHIHQRAFNRLPKLRYLSISNTGIVV
FPDLTSIGSLEADFILDICDNLHLQSIPPNAFTGMTTEDTTMNLYNNGFKEIHKYAFNGT
KIDKLTLKNNRKLQIIHKDAFMGAHGPAVLDVSSTALETLPPQGLQSVLMLVARSAFLLK
RLPPLNSLESLREAHLTYPSHCCALLSWDTNRESSSSAQRNGSSYCEHQSALDKDSKKEA
SYSDLLDQLSEASFGNVDFEYPDFCQIKPALQCSPEADAFNPCEDIAGFGFLRVAIWFIN
ILAIAGNLTVLLVLFASRCKLTVPRFLMCHLAFADFCIGVYLLMIAIVDLRTRGYYSQHA
IEWQTGVGCNIAGFLSVFGGELSIYTLSTITIERWYTITHAMQLERRLTLPQAAAIMAAG
WLLCLGMALLPLVGISSYSKVSMCLPMDIETPLAQAYVILLLLFNVGAFLVICGCYVRIY
VVVHHPEVPGRAADAKIAKRMAVLIFTDFLCMAPISFFAISAAFKVPLITVTNSKILLVL
FYPINSCANPFLYAIFTKAFRKDTCILLSSMGCCESKANMYRMKTYCSENTAKITSSSVS
KPPHTAMWLSSYPHQKCQLQIEGLQKDCCREHNTF
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctttgttcgtaaattcgatttggaaaagaggttatttactgtaacctgtcca
gtgcgcgcctttgcggattatacgaacaagaaagggaactcgctgaagacaacgaacgga
agacaagcattcagaatgaggacatcacttttcatcctgatcgtaatgatgtgtcagtgt
gattgtttgcgctttgtgtgtccggaggtgtgtcggtgctccatcaagaccatcagctgc
aacagcgcgactgaagccgcggcacagaaacggcagcaagtcagcagactggttctgaac
tatatccacttaagaacaattcccagtttcagctttgatggactgaaaggtgtcaaaaga
atagaaattgctcaaagtgtgacattggaaaccatagagacccaggccttcaacaacctc
ctcaacctctcagagatatcaattcaaaacacacgaagcctggtccatatccaccagcgg
gccttcaaccgtttacccaagctgagatatctgagcatctccaacactgggatagttgtg
tttcctgacttgacatccattggatctcttgaagctgatttcatactcgatatctgtgac
aatctccacttgcaatcaatcccaccaaatgccttcactggaatgacaactgaagacaca
acaatgaatctatataacaatggcttcaaggaaatacacaaatatgccttcaatggaaca
aaaatagataaactaaccttaaagaacaaccgaaagctgcaaataatccacaaggatgct
tttatgggagctcatggcccagctgtattagatgtgtcctccactgccctcgaaacgttg
ccacctcaaggcctacagtctgtgctgatgctggtggctcgttcagcatttttgctaaaa
agattgcctcctctaaacagtttggagagcctgagagaggctcatctcacctacccgagc
cattgttgtgctctcctcagctgggacactaacagggaatcgtcatcttcagcacagaga
aatggatcttcatactgtgaacaccaaagtgcattagataaggattccaaaaaagaggct
tcttattctgacctgctggatcagctatccgaggccagctttggcaacgtggactttgaa
tacccagacttctgtcaaatcaagccagccctccagtgcagcccagaggcagatgctttt
aacccctgtgaagatattgctgggtttgggtttctccgcgtggctatctggttcatcaac
atcctggctattgctggcaacctgactgtacttcttgtgttatttgccagccgctgcaaa
ctcactgtgccacgcttcctcatgtgtcatctggccttcgctgacttctgcatcggcgta
tacctcctcatgatcgcaattgtagatctaaggacacgcggatactatagccagcatgcg
atcgaatggcagacaggagtgggatgcaacatcgcaggctttctttctgtgtttggggga
gagctgtccatctacacactgtctacgattacaatagaacgttggtacaccatcactcat
gctatgcagctagagcgccgtctaactttgccccaggctgctgcaataatggctgctggc
tggttgctctgcctgggcatggcactacttccactagttggcataagtagttacagcaaa
gtcagcatgtgtctgcccatggacattgaaacacctttggctcaggcttatgtcattctt
ttactgcttttcaacgtgggggcttttttggtgatttgtggttgttatgtgcggatctac
gtggttgtccaccaccctgaagtgcctggtcgtgctgctgatgccaaaatcgccaagcgc
atggcagtgctcatcttcaccgactttctttgcatggcaccaatctctttctttgcaatc
tcagctgcctttaaggtgcccctaatcacagtcaccaactccaagatcctgctagtgctc
ttctatcctatcaactcctgtgccaaccctttcctctatgccatcttcaccaaggccttc
aggaaagacacctgcattctgctaagctccatggggtgctgtgagagcaaagcaaacatg
taccgcatgaagacctactgctcagaaaacacagcaaaaattacaagttcttcagtcagc
aagccccctcacactgccatgtggttgtccagctatcctcaccaaaagtgccagctgcag
atagaggggctacagaaagactgctgtagagaacataacacattctga
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