Clarias gariepinus (North African catfish): 128528995
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Entry
128528995 CDS
T10780
Symbol
dtx4b
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128528995 (dtx4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128528995 (dtx4b)
Enzymes [BR:
cgar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128528995 (dtx4b)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128528995 (dtx4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-RING_2
WWE_5
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-RING_Vps41
zf-UDP
PHD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
128528995
NCBI-ProteinID:
XP_053358246
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All DBs
Position
8:complement(13833138..13851089)
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AA seq
737 aa
AA seq
DB search
MDTVLLASAAVVWEWLNEHGRWRPYSPAVSHHIEAVIRSESRGGSVVLGQADSRLSPYII
DLQSMHQFRQDTGTLRPVRRSFYDPTSAPGQGWLWEWENDAGSWTPYDMEVCIALQAAWD
RQQAWLDLAPLGFCYLVDFQSMTQINQQTQRRRRIQRRSDMAYPLVSGPLPKAPQGWGTL
PGGAAGGGGTAGGGSTGALLGVGVSGSSSSGNGGPLYPSGTLSMSSLSPPGQPCACQQCM
LVLSVKANAMTSQTLGRRAPPSKALSPKSSRGTLPYSSTTSSISNAYSQTLPHGLSLNRS
LSQERKNAADFAQSLSMLTSNTATLSLSSSRPPPPSLPPPPPPPASHQQSLSMSSCNSTS
SQSVPTATLITVATSSTSCSSSSSASTAVPPQRSAACAAPLPLRASLAGLSRPALQRIAM
AQSRALIASGVQTVPVKNLNGSSPIHPALAGITGILMSAAGLPVCLTRPPKLVLHPPPVS
KSDIKPIPGLGHCCRKTTKKQARKGKTPEEVVKRYLQKVKNPPEEDCTICMEPLTGPSGY
KGPGVGAVSRAESVGRLAQCGHQYHLQCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPP
GKMEYHVIPHSLPGHPDCKTIRIIYNIPPGIQGTEHPNPGKPFTARGFPRHCYLPDSEKG
RKVLRLLLVAWDRRLIFSVGTSSTTGEADTVIWNEIHHKTEFGSNLTGHGYPDPSYLDNV
LEELKAQGMTEEDGQQL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacacggtgttgctggcctcggccgcggtggtatgggaatggctgaacgagcacggc
cgctggaggccgtacagcccggctgtgtctcatcacatcgaggcggtgatccggagcgaa
tcccggggagggagcgtcgtgctaggccaagccgacagccgcctctcgccctacatcatc
gacttgcagtcaatgcatcagttcaggcaggacacaggtactttaagaccagtacgtaga
agtttctatgaccccacttcagcaccaggtcagggctggctgtgggagtgggagaatgat
gcgggttcttggacaccatatgacatggaggtgtgcattgccctgcaggcggcatgggat
cgtcaacaggcatggttggatctggcaccgcttggcttctgctacctcgtggactttcaa
agcatgactcagatcaaccagcaaacacagaggcgtcgccgcattcagagacgttcagac
atggcctatccacttgtctctgggccattgccaaaagcccctcaaggttggggtactctg
cctggaggtgctgctggtggtggaggcactgcaggtggtggttcaactggagcacttctg
ggagttggagtttctggatctagctcaagtggaaatggtggtccactctaccctagtgga
acactttcaatgtcctcactttcccctcctggacagccatgtgcctgtcaacagtgcatg
cttgtcttgagtgtcaaagcaaatgccatgacatcacaaacgctaggacgcagagcacca
ccctcaaaagcactcagtcctaaatctagtcgagggacgcttccatactcctctacaacc
tcatccatatcaaatgcatactcacaaacactgcctcatgggctgtctttaaaccgctca
ctctcacaagagcgcaagaacgctgctgattttgctcagtcattgtctatgcttacctca
aacactgccactctttctttgtcctccagtcgcccacctccaccatctttgccccctcca
ccacctccaccagcatcccatcagcagtccttatcaatgtcaagctgtaactcaacatca
tctcaatcagtaccaactgcaacgctcattactgtggccacaagcagcacatcttgttca
tcctcatcatcagcatcaacagctgttccacctcaacgttctgcagcctgtgctgctcct
ttgccccttcgtgccagtctggcggggctgagtcggccagcactgcaaagaattgccatg
gcacaatcccgggcactcatcgcttctggtgtgcaaacagtgccagtgaagaacctcaat
ggttccagtcccattcatccagctttagcagggatcacaggtattctaatgagtgcagct
gggctgcctgtgtgtttgactcgtcctcctaaactggtgcttcaccctcctcctgtcagc
aaaagcgacatcaaacccatccctggtcttggacactgctgtcggaagaccaccaaaaaa
caagctcgcaaaggcaagactccagaggaagtagtaaagcggtatctacagaaagtcaag
aatcccccagaagaggactgcactatctgtatggaacctttgactggcccctctggttat
aaaggtccaggtgtgggtgctgtgtcccgtgcggaatcagtcggtcggctggcacagtgt
ggccatcagtaccatctgcagtgcctggtagctatgtacaacaatggaaacaaagatggc
agcttgcagtgtcccacatgcaaaacaatctatggtgtgaagacgggcaatcagccacct
gggaagatggaataccatgtcattcctcactcacttccgggacaccctgactgcaaaact
attcgtataatatacaacataccacctggcatacagggcactgagcatccaaacccagga
aagcctttcacagcaagaggatttccgcgacactgctatcttccagacagtgagaaagga
cggaaggtgttgagacttttattggtcgcctgggaccggaggttgatcttctcggtgggt
acatctagcaccacgggtgaggcagatacagtcatctggaatgagatccaccataaaaca
gagtttggctctaacctcacaggccatggctaccctgaccctagctatctggacaatgtg
ttggaggagctaaaggcccagggcatgacagaggaagatggtcagcagctgtga
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