Clarias gariepinus (North African catfish): 128529104
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Entry
128529104 CDS
T10780
Symbol
slc1a1
Name
(RefSeq) excitatory amino acid transporter 3
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128529104 (slc1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128529104 (slc1a1)
Transporters [BR:
cgar02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
128529104 (slc1a1)
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Gene cluster
GFIT
Motif
Pfam:
SDF
CENPU
Motif
Other DBs
NCBI-GeneID:
128529104
NCBI-ProteinID:
XP_053358419
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Position
1:complement(32829896..32843278)
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AA seq
529 aa
AA seq
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MSMDMLAKKERRGRDVKGMLKRNWVLIATIISVLLGIGLGVLVREYAALSHLDKKYFGFP
GELLMRMLKLVILPLIISSMITGVAALDSEVSGRIGLRAVVYYFSTTIIAVILGIILVTT
IKPGVSQTADNIDRAGSTPNVTTADTLLDLIRNMFPENLVQACFQQYKTQRKEIELPVSN
DSNLVTTTFPPLTNILATVAQNLTKDYTIVGMYTDGINVLGLIVFCVAFGLVIGKMGERG
RILLEFFDALNEATMRLVHIIMCYMPVGILFLIAAKIIEVEDWDIFRKMGLYMVTVLSGL
AIHAIIFLPLIYFVFVRKNPFTFALGMAQALVTALMISSSSATLPVTFRCAEENNRIDKR
ITRFVLPVGATINMDGTALYEAVAAIFIAQLNGLDLDVGQIVTISITATVASIGAAGVPN
AGLVTMVIVLTAVGLPASDVTLIVAVDWLIDRFRTMVNVLGDAFGAGIVQKLSKHELERM
DLTSDVDVANPFALETTLDDEECEKKSYVNGGFTVDKSDAISFTETSQF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggatatgttggccaagaaggagcggagaggcagggatgtgaaaggcatgctg
aagaggaactgggttctcatagcaaccatcatctctgtgctactgggaataggtctaggt
gtgttagtaagggagtatgctgcactctcacaccttgataagaaatactttggcttccct
ggagagctcctgatgagaatgttaaagcttgttatcttacccctcatcatctccagcatg
ataacaggtgtagcagctcttgattcagaagtgtcaggccgcatcggactccgtgcagtc
gtctactatttctccacaaccatcatagctgtcattcttggtataatcttggtaacaact
attaaacctggagtctctcagacagcagacaacattgaccgagctggatccactccaaat
gtcaccaccgctgacactctgttggatcttatcaggaacatgtttccagagaatcttgtg
caggcatgttttcagcagtacaagacccagcgcaaggagatagaattgcctgtttcaaac
gacagcaatttggttacaacaacattcccacctttaaccaacatattggcaactgttgca
cagaacctgaccaaagactacactattgtgggcatgtacacagatggcatcaatgttctc
ggccttattgtgttttgtgttgcatttgggctggtaattggcaaaatgggagaacggggg
cgtatcctgctggagttcttcgatgccctaaatgaggccactatgagattggtacacatc
attatgtgctacatgccagtgggtattttatttctaattgctgctaagataattgaggta
gaggactgggatatcttcaggaaaatgggcctgtacatggtgactgtgcttagtggactt
gccatccatgccattatttttctacccctgatctacttcgtctttgtaagaaagaatccc
ttcacgtttgctttgggaatggcacaagctttggtaacagctttaatgatctcctcaagc
tctgcaaccttaccagtcaccttccgatgtgccgaggaaaataataggattgacaagcgg
atcacacggtttgtccttccagtgggggccaccattaacatggacggtacagcactttat
gaggcagtggcggccatatttattgcccagttaaatggtcttgaccttgatgtgggacaa
atagtgacaattagtattacggcgacagtagccagcatcggagcagctggagttcctaat
gctggactggtaaccatggtgatcgtgctgacagcagtgggccttcctgccagtgatgtc
accctcattgtggctgttgattggctcattgatcggttccgcactatggtcaacgtgctg
ggggatgcctttggtgctggaatagttcagaagctctcaaagcacgagttggaaaggatg
gaccttacctctgatgtagatgtagccaatccgtttgccctcgaaacaactctggatgat
gaagagtgcgagaagaaatcctacgtcaatggcggctttactgtggacaaaagtgatgcg
atttcctttacagagacctcacagttttag
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