Clarias gariepinus (North African catfish): 128529191
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Entry
128529191 CDS
T10780
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128529191 (col13a1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128529191
NCBI-ProteinID:
XP_053358544
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Position
8:complement(19652597..19733624)
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AA seq
736 aa
AA seq
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MEQDSKVPRDAPGGRTCAEHPCKSGAVAVCVALCLFSLGVCVLVYLRTSELQARVNSMEK
HREPQYTAWMFLEQVEPVLLNRLDQMLEEKLASRLPKTRETRDVSHACLCPPGPPGPPGR
AGFPGDKGSMGIPGRMGLKGSTGEKGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLD
GTPGQNGQKGDMGPPGPKGLPGEPGPKGEKGVCGDYTHRMLPITVRNMPSISPLILKRLK
QGEPGAQGPPGPPGPPGPPGSQGLTGANGPPGKPGEPGKPGKDLRMLTGMKGEPGVPGQK
GDRGETGLTGPEGLKGSKGDQGHKGEEGRIGVAGEKGEKGERGMPGMPGKQGVKGNLGFP
GAPGLKGQTGISGIPGKRGYKGEKGEPSSSGVGIKGEPGVPGMPGSKGEKGDQGIKGETG
TEGQPGPRGPPGATGEPGKMLINNNENDIRNVHLMGPPGLPGPPGLPGSKGEVGLPGPPG
LDGEKGPRGKPGEPGPAGPSGPEGPRGEGGIMGLPGPKGDKGDMGPSGSPGLDGPTGEKG
AQGAPGPIGLPGSMGQKGEAGENGEKGDQFYGPPGPPGPAGPVGPMGPPGLSGPKGEPGF
GIRGEKGSPGQKGDKGDRGHLGLPGAHGLDGKPGPVGLIGPPGIPGPAGPKGERGEKGEM
GVAGPRGPQGIPGLVGPPGLKGNRGERGKRGNRGAKGDKGDQGAPGLDAPCPLGDDGLPV
PGCWNKGQNPFQLAKK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggacagtaaagttcctcgcgatgctcctggaggaaggacttgtgccgagcat
ccgtgtaaaagcggcgcggtggcggtgtgtgtggcgctctgcctcttctctctcggagtg
tgtgtgctggtgtatctgcgcacctcggagctacaggcaagggtcaacagcatggagaag
caccgagagcctcagtacacagcctggatgtttctcgagcaggtggaaccagtgcttcta
aaccgcctggatcagatgctggaggagaagttagcgtctcgtctgccgaagaccagagag
actcgggatgtctcccatgcctgtctgtgtccaccagggcctcctggtcctcctggacga
gctggctttccgggagacaaaggatcaatgggcattcctggaagaatgggcttaaaggga
agcacaggggaaaagggagctccaggagagccaggtctatctatcattggcccacgagga
cctcctggtcagccgggcactagaggatttcctggctttccgggtccgattggcttggat
ggcacacctggacaaaatggtcagaaaggggacatgggcccacctggtcccaaaggactt
cctggtgaaccaggtccaaaaggggaaaagggtgtgtgtggtgattatacacatcggatg
ttgcccatcaccgtgcgcaacatgccctcaataagccctctaattctaaagcgcctcaag
cagggcgaacctggagcacagggaccaccgggccctcctggccccccagggcctcctggt
agccaaggattgactggtgctaatgggccaccgggaaaacctggagaacctggaaaaccg
ggaaaagacctaaggatgttgacaggaatgaagggagagccaggtgtaccaggccaaaag
ggtgaccgtggtgagacagggttaactggacctgaaggcctaaagggatccaaaggagat
caaggacataagggagaggaggggaggataggtgttgcaggagagaaaggagagaagggt
gagagagggatgcctgggatgcctggaaaacaaggagtgaagggaaatcttggttttcca
ggggctcctggattaaagggtcagacaggtatttccggtatacccgggaaacgaggctat
aagggtgaaaagggggaaccaagctcttcgggtgttggcattaaaggagaacctggagtg
ccgggaatgcctggatccaagggtgaaaaaggtgatcaaggcattaagggtgaaacagga
actgaaggccaacctggaccaagaggtcctccaggtgcaacaggggaaccaggaaaaatg
ttgatcaacaacaacgagaatgatattcgaaatgtgcatttaatgggcccacctggtcta
ccagggcctcccgggttacctggatccaagggtgaagttggactgcctgggcctcctggt
cttgatggcgaaaagggtcctcggggaaaaccaggagagcctggacccgctggcccatct
ggacctgaagggccacgaggagagggaggaattatgggcttaccaggccctaaaggggat
aaaggagacatgggtccgtctggttcacctggtttagatggccctactggtgaaaaaggg
gctcaaggggctcctggccccattggattaccaggctcaatgggtcagaaaggtgaagca
ggagagaatggagaaaaaggagaccagttctatggcccaccaggacctccaggacctgca
ggacccgtggggccgatgggacctccgggattgtcagggccaaagggggagccaggtttt
ggtataagaggagagaaaggatcacctggacagaaaggagataaaggcgacaggggtcat
cttggactaccaggagctcatggtttagatggcaagcctggtccagtgggtcttataggg
ccgcctggtatacctggaccagcaggaccaaaaggagagcggggtgagaaaggagaaatg
ggagtagcaggaccaagagggcctcaaggcatccctggcttagtaggaccaccaggacta
aaaggaaaccggggggagaggggcaagagaggcaacaggggggccaaaggggataaggga
gaccaaggagccccaggattagatgccccttgtcctttgggtgatgatggtctaccagta
ccaggatgttggaataaaggtcagaatcctttccagctggctaagaagtaa
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